Clone BO23358 Report

Search the DGRC for BO23358

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:58
Vector:pDNR-Dual
Associated Gene/TranscriptCG15124-RA
Protein status:BO23358.pep: Imported from assembly
Sequenced Size:607

Clone Sequence Records

BO23358.complete Sequence

607 bp assembled on 2010-03-31

GenBank Submission: KX795567

> BO23358.complete
GAAGTTATCAGTCGACATGGATAACGACAATATGCTCGACTTTACAGACT
TAATCAGCTGCAAGGACTTACCGAACATAACTCTGCACAATATCCGTCCC
ATTTACAGTATAAAGGTTTTCATGTCCGAACCTAAAAACTCCAATGTCTC
TATTGCTGAATTAATCAAACGCCAGGAAGTGTCTGCAGAGCAATGTCGCA
AGGCACTTAAAGTCATAAAGGACAGACTTCTTCTGAAAATGGCAGCGTTG
CAAGAGCTTAAGAAGTATCTGCTGGATTTGCATTCGGAGATCAAAAAGCC
CGGTGCAGGGACTCGTTTTGTGACCAATCAGGAGAAAGTTAAATTGCATT
TCCTAGACGAGACGGAAATCAGAGAAGTCGAATTGTCTGACGCCGTAGAA
CGTTGCAATATAAAGCTGAGCTCGCTTTATTGCGAAATCCTGGCTTTGGA
CAGCGACATGGGCAGTGTCGCCTATTTGGAGAGGGTCGCCCAGATCAACA
AAGACTTTATCATGGATTGGCATAAGACTCAGAGGCAGAATAAGACAAGC
AACATCCATTGTTCCGGCCAAGGCGTCAAAAAGACTTTTGCAAGCTTTCT
AGACCAT

BO23358.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:42:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG15124-RA 576 CG15124-PA 1..573 17..589 2865 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:42:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG15124-RA 752 CG15124-RA 92..664 17..589 2865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:42:44
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19643038..19643610 17..589 2865 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:42:45 has no hits.

BO23358.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:29:01 Download gff for BO23358.complete
Subject Subject Range Query Range Percent Splice Strand
CG15124-RA 1..573 17..591 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:35 Download gff for BO23358.complete
Subject Subject Range Query Range Percent Splice Strand
CG15124-RA 92..664 17..591 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:23:29 Download gff for BO23358.complete
Subject Subject Range Query Range Percent Splice Strand
CG15124-RA 92..664 17..591 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:23:29 Download gff for BO23358.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19643038..19643610 17..591 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:35 Download gff for BO23358.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15530543..15531115 17..591 99   Plus

BO23358.pep Sequence

Translation from 16 to 607

> BO23358.pep
MDNDNMLDFTDLISCKDLPNITLHNIRPIYSIKVFMSEPKNSNVSIAELI
KRQEVSAEQCRKALKVIKDRLLLKMAALQELKKYLLDLHSEIKKPGAGTR
FVTNQEKVKLHFLDETEIREVELSDAVERCNIKLSSLYCEILALDSDMGS
VAYLERVAQINKDFIMDWHKTQRQNKTSNIHCSGQGVKKTFASFLDH

BO23358.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:57:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG15124-PA 191 CG15124-PA 1..191 1..191 975 100 Plus