BO23364.complete Sequence
379 bp assembled on 2010-03-31
GenBank Submission: KX798470
> BO23364.complete
GAAGTTATCAGTCGACATGGTCAAGAAGACATCCGCCAGCCTGGGAAAGA
GCATCTTGCTGGGAGTTCTGTTGTTTCTCGCCGTACACGCACTTCTCACC
GAGGCGGCCCCCTTCCAGGAGCTGGAGCCTCGCAAAGGTCATGTGCCCGT
CTACATCCGACATGGCGATGAGCCACTCAGCGAAATCCATCCAGGACTGG
CCGAGGCCTTCAAGGAGGGCGAATCGAAGAGTCTCGTCACCGAATCTCCC
CAGGCGGAAACTACAAACCCACCAACCACATCCGATGCTCCCGCTCCCGC
TCCGTCCAGCTCCACGGTATCGGATATAGCCAGCTTTGAGGCCATCAAAG
GAAAGACGGATGCAAGCTTTCTAGACCAT
BO23364.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:32:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14984-RC | 348 | CG14984-PC | 1..345 | 17..361 | 1725 | 100 | Plus |
| CG14984-RB | 348 | CG14984-PB | 1..345 | 17..361 | 1725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:32:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14984-RC | 709 | CG14984-RC | 202..547 | 16..361 | 1730 | 100 | Plus |
| CG14984-RB | 579 | CG14984-RB | 72..417 | 16..361 | 1730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:31:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3951355..3951492 | 361..224 | 675 | 99.3 | Minus |
| 3L | 28110227 | 3L | 3951752..3951877 | 229..104 | 630 | 100 | Minus |
| 3L | 28110227 | 3L | 3952261..3952349 | 104..16 | 445 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:31:59 has no hits.
BO23364.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:04 Download gff for
BO23364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14984-RB | 73..417 | 17..363 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:23 Download gff for
BO23364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14984-RB | 73..417 | 17..363 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:06 Download gff for
BO23364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14984-RB | 73..417 | 17..363 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:06 Download gff for
BO23364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3951353..3951486 | 230..363 | 98 | <- | Minus |
| 3L | 3951752..3951876 | 105..229 | 100 | <- | Minus |
| 3L | 3952261..3952348 | 17..104 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:23 Download gff for
BO23364.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3951353..3951486 | 230..363 | 98 | <- | Minus |
| arm_3L | 3951752..3951876 | 105..229 | 100 | <- | Minus |
| arm_3L | 3952261..3952348 | 17..104 | 100 | | Minus |
BO23364.pep Sequence
Translation from 16 to 379
> BO23364.pep
MVKKTSASLGKSILLGVLLFLAVHALLTEAAPFQELEPRKGHVPVYIRHG
DEPLSEIHPGLAEAFKEGESKSLVTESPQAETTNPPTTSDAPAPAPSSST
VSDIASFEAIKGKTDASFLDH
BO23364.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:46:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14984-PC | 115 | CG14984-PC | 1..115 | 1..115 | 577 | 100 | Plus |
| CG14984-PB | 115 | CG14984-PB | 1..115 | 1..115 | 577 | 100 | Plus |
