BO23368.complete Sequence
481 bp assembled on 2010-03-31
> BO23368.complete
GAAGTTATCAGTCGACATGAAAGCAAGCTTATTTGAAGCTAAAATCGAAC
GTCTGGGGCGTTCAGATTACGGACTTTCGGCCATCTTAGAGTGGAAATAT
GACACGAATGAGGAAACGATGGTTGAGGCACAAGCGTATCGCAGTAATTC
GGGCGATGAGAGTGATTACAAGCTGCTACCCTGGGCAATACCCAAACAGC
CCTTCTATGATTACATCAACACCTACTATAAGGATGTGATCTCAAAAAAC
CTCGGCTACTGCTCCAATCTACCCAAATACGAAGATAAATTTCAGCCTCC
CTGGCCAAAGAACACCTATAAGCTTGACAAGTGCAAAATCGGTGGTGATG
GATTGCCGGAAATCGCTCCGCCAGGATTCTACAAGATCGTATTCACTAAA
TTTGGTCCTGGGCAGCCAACTTGGGGTTTCACAGCCGTTTTTAAGCTGAC
TAACAAAATTTTCGCAAGCTTTCTAGACCAT
BO23368.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:32:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18536-RA | 576 | CG18536-PA | 125..573 | 17..463 | 2180 | 99.6 | Plus |
| CG18537-RA | 567 | CG18537-PA | 190..341 | 89..240 | 265 | 78.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:32:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18536-RA | 788 | CG18536-RA | 277..725 | 17..463 | 2180 | 99.6 | Plus |
| CG18537-RA | 607 | CG18537-RA | 207..358 | 89..240 | 265 | 78.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:32:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18295253..18295595 | 121..463 | 1715 | 100 | Plus |
| 2R | 25286936 | 2R | 18295091..18295199 | 17..123 | 480 | 98.2 | Plus |
| 2R | 25286936 | 2R | 18296307..18296407 | 140..240 | 205 | 80.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:32:52 has no hits.
BO23368.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:08 Download gff for
BO23368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18536-RA | 277..725 | 17..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:37 Download gff for
BO23368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18536-RA | 277..725 | 17..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:24 Download gff for
BO23368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18536-RA | 277..725 | 17..465 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:24 Download gff for
BO23368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18295091..18295197 | 17..121 | 98 | -> | Plus |
| 2R | 18295254..18295595 | 122..465 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:37 Download gff for
BO23368.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14182596..14182702 | 17..121 | 98 | -> | Plus |
| arm_2R | 14182759..14183100 | 122..465 | 99 | | Plus |
BO23368.pep Sequence
Translation from 16 to 481
> BO23368.pep
MKASLFEAKIERLGRSDYGLSAILEWKYDTNEETMVEAQAYRSNSGDESD
YKLLPWAIPKQPFYDYINTYYKDVISKNLGYCSNLPKYEDKFQPPWPKNT
YKLDKCKIGGDGLPEIAPPGFYKIVFTKFGPGQPTWGFTAVFKLTNKIFA
SFLDH
BO23368.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:46:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18536-PA | 191 | CG18536-PA | 48..191 | 6..149 | 799 | 100 | Plus |
| CG18537-PA | 188 | CG18537-PA | 46..188 | 7..149 | 545 | 65.7 | Plus |
| CG18539-PB | 185 | CG18539-PB | 47..184 | 9..148 | 464 | 54.3 | Plus |
| CG14502-PD | 188 | CG14502-PD | 49..187 | 8..148 | 431 | 51.8 | Plus |
| CG14502-PC | 188 | CG14502-PC | 49..187 | 8..148 | 431 | 51.8 | Plus |
