Clone BO23373 Report

Search the DGRC for BO23373

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:73
Vector:pDNR-Dual
Associated Gene/TranscriptCG8840-RA
Protein status:BO23373.pep: Imported from assembly
Sequenced Size:448

Clone Sequence Records

BO23373.complete Sequence

448 bp assembled on 2010-03-31

GenBank Submission: KX794218

> BO23373.complete
GAAGTTATCAGTCGACATGGCTTCCATGGAGCTGACCCTGAAATCGGACT
ATTCCGCCGATTCTGTTATCGATGACATTATATCCAAGTCGCTGGCATCC
CAGGCAGTTCCAAGGACACACAAGAGATCAACTCGCGTCTCCTTTCGATC
CCTGGCCAAAGTTATAATGACTCTGATCGGAAACCTCAAGAAGGCATCAT
CATTTCATGAGGTGAAGGACATAGACTACTGGCGTAATCTGGCCGAGTCC
CGTTTGGAGGTCAACAATCGCTATGGGAGGTTTATCGAAGCCCAGCAAAG
GCGAATCTATACCCTGGAGACCAGGCTCCACAACCTGGTCAATTTGGCCC
GCGAGACCCAGAAAATGCTGGCCGAGATTGGGGCCGAGAAGCGGGCCTGC
GAGGAACTTGGCCATGGCGAGCACGCCGACGCAAGCTTTCTAGACCAT

BO23373.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:34:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG8840-RA 417 CG8840-PA 1..414 17..430 2070 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG8840-RA 640 CG8840-RA 131..544 17..430 2070 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:02
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3410690..3411103 17..430 2070 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:34:02 has no hits.

BO23373.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:10 Download gff for BO23373.complete
Subject Subject Range Query Range Percent Splice Strand
CG8840-RA 87..500 17..432 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:51 Download gff for BO23373.complete
Subject Subject Range Query Range Percent Splice Strand
CG8840-RA 131..544 17..432 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:52 Download gff for BO23373.complete
Subject Subject Range Query Range Percent Splice Strand
CG8840-RA 131..544 17..432 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:52 Download gff for BO23373.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3410690..3411103 17..432 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:51 Download gff for BO23373.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3410690..3411103 17..432 99   Plus

BO23373.pep Sequence

Translation from 16 to 448

> BO23373.pep
MASMELTLKSDYSADSVIDDIISKSLASQAVPRTHKRSTRVSFRSLAKVI
MTLIGNLKKASSFHEVKDIDYWRNLAESRLEVNNRYGRFIEAQQRRIYTL
ETRLHNLVNLARETQKMLAEIGAEKRACEELGHGEHADASFLDH

BO23373.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:46:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG8840-PA 138 CG8840-PA 1..138 1..138 690 100 Plus