Clone BO23374 Report

Search the DGRC for BO23374

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:74
Vector:pDNR-Dual
Associated Gene/TranscriptCG9072-RA
Protein status:BO23374.pep: Imported from assembly
Sequenced Size:481

Clone Sequence Records

BO23374.complete Sequence

481 bp assembled on 2010-03-31

GenBank Submission: KX797568

> BO23374.complete
GAAGTTATCAGTCGACATGTACAATCGCCACATCGCCCACTTATCGGCCG
TGCAGGCCAACGATACGCGCCATAATGCCACGCTGCGTTTCCAGAGTCGT
CCCACGGATAACGTCTACTCGGATCCACGCCTCGAGCAACTGATTGTCTA
TCGGGCTTTGTTGCAGCACCTGCTGCAACAGAAGGATCACTATGATCACG
AACGGGAGCTGGAACTCCAGCGTCTCGAGCGCTTTCGCAGCGAGGGAGCC
AACGAGCGCCGTTTGCAGATCCAGGAGCAAGTGCTCAAAAAGGCACAGGG
CATGCTGCCTGGCATCGTTTTCAAAATGCGCAACGAGGTGGACAAGCTGA
AGCGCTTCCTCGACATCGACAAGCAGCAGGAGCTGCGCCAACTGGACACC
GCCCTCTACGACAACTGCGTCGAGCTACTCAATAACTGTCAATCTTCTCT
GGAAAACATTAATGCAAGCTTTCTAGACCAT

BO23374.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:35:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG9072-RA 450 CG9072-PA 1..447 17..463 2235 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:35:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG9072-RA 585 CG9072-RA 83..530 16..463 2240 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:58
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 15095513..15095960 463..16 2240 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:34:59 has no hits.

BO23374.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:14 Download gff for BO23374.complete
Subject Subject Range Query Range Percent Splice Strand
CG9072-RA 75..521 17..465 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:00 Download gff for BO23374.complete
Subject Subject Range Query Range Percent Splice Strand
CG9072-RA 84..530 17..465 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:09 Download gff for BO23374.complete
Subject Subject Range Query Range Percent Splice Strand
CG9072-RA 84..530 17..465 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:09 Download gff for BO23374.complete
Subject Subject Range Query Range Percent Splice Strand
X 15095510..15095959 17..465 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:00 Download gff for BO23374.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 14989543..14989992 17..465 99   Minus

BO23374.pep Sequence

Translation from 16 to 481

> BO23374.pep
MYNRHIAHLSAVQANDTRHNATLRFQSRPTDNVYSDPRLEQLIVYRALLQ
HLLQQKDHYDHERELELQRLERFRSEGANERRLQIQEQVLKKAQGMLPGI
VFKMRNEVDKLKRFLDIDKQQELRQLDTALYDNCVELLNNCQSSLENINA
SFLDH

BO23374.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:46:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG9072-PA 149 CG9072-PA 1..149 1..149 766 100 Plus
CG1890-PA 110 CG1890-PA 2..109 35..146 140 29.5 Plus