BO23379.complete Sequence
784 bp assembled on 2010-03-31
GenBank Submission: KX799423
> BO23379.complete
GAAGTTATCAGTCGACATGGTGGTTATCAAGAAGGACAGAGGAATGGCTT
CAAATCTCCAACAGGCAATTCGAACGCATGGTTTTATTTCACTATACGAT
GGATTAAGTGCCCAGTTATTGAGACAGCTGACATACACCTCGATGCGGTT
TCACCTGTACGAAATGGGAAAGGAGCACCTGGATGATCCTGCTGGTTTGT
TGGACAAAGTGCTGGTGGCTGCATTGGCTGGTTGTGTGGCTGGTGTGGTG
GGTACACCCATGGAGTTGATCAACACCCGGATGCAGGTCAATCGCGCGCT
GCCCAAGGAAACGCGGTGGAACTATCGAAACGTCTTCGATGGACTGTACC
GTGTGACCAGGGAAGAGGGCTTTACGAAGCTGTACAGCGGATGTTTCCTC
TCCTTTATGCGGTCCAGCCTCATCACCATCAGCCAAAATGCTGCTTACGA
TCAGGCCAAGCAGATCTACGCAGAATTTTTTCACATGAAGCACGACAACA
CATTGCTGCACCTGATAAGTTCCGTGACGGCTGCTTTCGTCTGCGGTCCA
ATCATCAAGCCCATTGAGAACTTGAGATACCTCAGAATGGTGGATTCAAG
AAGATTGATAAATTCCATTTCCTATATGATGCGCTTCGGAAGTCGCGGAC
CTTTTCGCGGTATGGTGCCCTATGTTTTGCGCATGGTACCCAATACGGTC
ATTACTTTTTTAAGTTTCGAGCAGCTTCGTGTTAATTTTGGGTACATTGA
AATTGAAGATGATGAAGCAAGCTTTCTAGACCAT
BO23379.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:36:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6893-RB | 753 | CG6893-PB | 1..750 | 17..766 | 3750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:36:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6893-RB | 1164 | CG6893-RB | 284..1033 | 17..766 | 3750 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:36:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18694767..18695142 | 80..455 | 1880 | 100 | Plus |
3L | 28110227 | 3L | 18695203..18695517 | 452..766 | 1575 | 100 | Plus |
3L | 28110227 | 3L | 18694524..18694589 | 17..82 | 330 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:36:43 has no hits.
BO23379.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:19 Download gff for
BO23379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6893-RB | 284..1033 | 17..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:22 Download gff for
BO23379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6893-RB | 284..1033 | 17..768 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:16:49 Download gff for
BO23379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6893-RB | 284..1033 | 17..768 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:16:49 Download gff for
BO23379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18694524..18694587 | 17..80 | 100 | -> | Plus |
3L | 18694768..18695141 | 81..454 | 100 | -> | Plus |
3L | 18695206..18695517 | 455..768 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:22 Download gff for
BO23379.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18687624..18687687 | 17..80 | 100 | -> | Plus |
arm_3L | 18687868..18688241 | 81..454 | 100 | -> | Plus |
arm_3L | 18688306..18688617 | 455..768 | 99 | | Plus |
BO23379.pep Sequence
Translation from 16 to 784
> BO23379.pep
MVVIKKDRGMASNLQQAIRTHGFISLYDGLSAQLLRQLTYTSMRFHLYEM
GKEHLDDPAGLLDKVLVAALAGCVAGVVGTPMELINTRMQVNRALPKETR
WNYRNVFDGLYRVTREEGFTKLYSGCFLSFMRSSLITISQNAAYDQAKQI
YAEFFHMKHDNTLLHLISSVTAAFVCGPIIKPIENLRYLRMVDSRRLINS
ISYMMRFGSRGPFRGMVPYVLRMVPNTVITFLSFEQLRVNFGYIEIEDDE
ASFLDH
BO23379.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:54:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6893-PB | 250 | CG6893-PB | 1..250 | 1..250 | 1286 | 100 | Plus |
Dic1-PC | 280 | CG8790-PC | 43..277 | 10..242 | 409 | 39.5 | Plus |
Dic1-PA | 280 | CG8790-PA | 43..277 | 10..242 | 409 | 39.5 | Plus |
Dic1-PB | 280 | CG8790-PB | 43..277 | 10..242 | 409 | 39.5 | Plus |
Dic4-PC | 302 | CG18363-PC | 47..292 | 1..242 | 391 | 34.8 | Plus |