Clone BO23382 Report

Search the DGRC for BO23382

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:82
Vector:pDNR-Dual
Associated Gene/TranscriptCG13155-RA
Protein status:BO23382.pep: Imported from assembly
Sequenced Size:742

Clone Sequence Records

BO23382.complete Sequence

742 bp assembled on 2010-03-31

GenBank Submission: KX794681

> BO23382.complete
GAAGTTATCAGTCGACATGGACACACGCTTGCTGACTGCACTATTGCTGA
TCGCGGCTTGCAGGGCCGAGGATCCAGATTTGGGTCAGGATCAGGATCAG
GCGAAGATCACGTTTAAGCCGGGCCGATATGTGCCACGCCTGCACGGTGC
CACGGGTTGGTATGTTCCGGATGATAGTGGAAAGTACCGGCACGATCCCA
GGCCCTATGACGGCGGCTATGGAGATCGTGGTGTTCCCTATGACTCCGAT
TTGAGCGGCATTTTCCGGAATGCCCAGCGCCAACTGGAGGCAAAGGTCCA
GGAGGCCGGTGAAGGTCTATCCCTCGGTCCACGAGATCATCTGCGATTCA
TGATCGACTTTAATTTCAATGGCACCGGCTGGCAGATAATCCAGTTTCAA
TGGGTACGAGATGGCGATGAGTCCCATCCAGACACCAAGGAGTACAGCTA
CTTGACGGAGAACAAGCTATGGGACTCGGATCAGGCCTATGCGTACCAGG
AGCCCGACGATGGCTGCCATATCAACTGTCAGCCGGAGACGGCGGTATAC
CCGCTACAATCGGAGCCTGTCCAGGAGCCAGTGGTGCAGCCAACTCAGGA
GCAGCAACAGTCCAGAACAAACATCAATTCAGAGCAGGATCCTGGCAAGA
TTCATGATACCATCAATGAAGTCCTGGAGTACATACAACAACGAATCCTG
CCTACGTTGCCAATTAAAGGGGAGGCAAGCTTTCTAGACCAT

BO23382.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:39:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG13155-RA 711 CG13155-PA 1..708 17..724 3540 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:39:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG13155-RA 751 CG13155-RA 1..713 12..724 3550 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:38:58
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12379798..12380428 640..10 3140 99.8 Minus
2R 25286936 2R 12379652..12379735 724..641 420 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:39:00 has no hits.

BO23382.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:22 Download gff for BO23382.complete
Subject Subject Range Query Range Percent Splice Strand
CG13155-RA 1..708 17..726 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:46 Download gff for BO23382.complete
Subject Subject Range Query Range Percent Splice Strand
CG13155-RA 6..713 17..726 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:33 Download gff for BO23382.complete
Subject Subject Range Query Range Percent Splice Strand
CG13155-RA 6..713 17..726 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:33 Download gff for BO23382.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12379650..12379735 641..726 97 <- Minus
2R 12379798..12380421 17..640 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:46 Download gff for BO23382.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8267155..8267240 641..726 97 <- Minus
arm_2R 8267303..8267926 17..640 100   Minus

BO23382.pep Sequence

Translation from 16 to 742

> BO23382.pep
MDTRLLTALLLIAACRAEDPDLGQDQDQAKITFKPGRYVPRLHGATGWYV
PDDSGKYRHDPRPYDGGYGDRGVPYDSDLSGIFRNAQRQLEAKVQEAGEG
LSLGPRDHLRFMIDFNFNGTGWQIIQFQWVRDGDESHPDTKEYSYLTENK
LWDSDQAYAYQEPDDGCHINCQPETAVYPLQSEPVQEPVVQPTQEQQQSR
TNINSEQDPGKIHDTINEVLEYIQQRILPTLPIKGEASFLDH

BO23382.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:54:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG13155-PA 236 CG13155-PA 1..236 1..236 1287 100 Plus