Clone BO23383 Report

Search the DGRC for BO23383

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:83
Vector:pDNR-Dual
Associated Gene/TranscriptCG13460-RB
Protein status:BO23383.pep: Imported from assembly
Sequenced Size:640

Clone Sequence Records

BO23383.complete Sequence

640 bp assembled on 2010-03-31

GenBank Submission: KX795270

> BO23383.complete
GAAGTTATCAGTCGACATGCGTCTGTTCGTGGCTCTGGTTTGTGTCAGTT
TGGTGGCAGTGTCATCTGCCCAGTTGTCACTGCGCGGAAGATTGGGACGC
TCATCGAAGGTGGATTTGGCAGTGGAGACACCCACTTTGCTGGCCAAGAC
AGCCGGACTTGTGCCCACTGTGCTTGTGAAAAATGCCGGCATAGTGCCCA
CTGTGTTGGTAAAGAATGCAGCCCAAATCTTACCTGCCGTCAATGTTGCC
GCCGATGTGGAAACGCCCAGCATCTTGCCCCAAGTGTCCAACAACATCTT
GCCCTACTATCCCCGCTACTGGCCCGACTATGGATCCTATGGATCCTATG
GCTATCCCGGCGGCTGGAACAGTCCCAGCTACTGGAATAATAACTACTAC
GACTATGGAGCACCCTATTTGCCCAGACGTCGTTTTGTTAAGCCCGTTGT
GTCCCCTGCCGTGATCACTGCACCCACTTCCACTGGCTCCTCGTCCACCA
GCAGCACTACTACCACTGTTTCTGGTGAGGATTCGCCATCTGTGACTACC
GATGTCGTTCCCGATCAGTCGGACGCTTCCGAAAATCAGGTTGCTGAACC
CGTGGTCACGACCCAGGTGATCGCAAGCTTTCTAGACCAT

BO23383.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:39:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG13460-RB 609 CG13460-PB 1..606 17..622 3030 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:39:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG13460-RB 677 CG13460-RB 30..635 17..622 3030 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:39:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15061071..15061676 622..17 3030 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:39:26 has no hits.

BO23383.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:23 Download gff for BO23383.complete
Subject Subject Range Query Range Percent Splice Strand
CG13460-RB 30..635 17..624 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:55:56 Download gff for BO23383.complete
Subject Subject Range Query Range Percent Splice Strand
CG13460-RB 30..635 17..624 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:41 Download gff for BO23383.complete
Subject Subject Range Query Range Percent Splice Strand
CG13460-RB 30..635 17..624 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:41 Download gff for BO23383.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15061069..15061676 17..624 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:55:56 Download gff for BO23383.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15054169..15054776 17..624 99   Minus

BO23383.pep Sequence

Translation from 16 to 640

> BO23383.pep
MRLFVALVCVSLVAVSSAQLSLRGRLGRSSKVDLAVETPTLLAKTAGLVP
TVLVKNAGIVPTVLVKNAAQILPAVNVAADVETPSILPQVSNNILPYYPR
YWPDYGSYGSYGYPGGWNSPSYWNNNYYDYGAPYLPRRRFVKPVVSPAVI
TAPTSTGSSSTSSTTTTVSGEDSPSVTTDVVPDQSDASENQVAEPVVTTQ
VIASFLDH

BO23383.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:55:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG13460-PB 202 CG13460-PB 1..202 1..202 1034 100 Plus