BO23384.complete Sequence
667 bp assembled on 2010-03-31
GenBank Submission: KX795618
> BO23384.complete
GAAGTTATCAGTCGACATGATTGCCAAGCTGCGCAAGATTTATCCCAGTG
GAAAGGTGGTTAGCCATTCCCTCGCTCCCTGCTCCACAGCGGATCTGAAC
AATGCTGAACTTGTTTCCAATGTCAAGAAAAGGCGAGCCGAATATCTCGT
CGAACGAATGCAGCGACTGCTGCTCTTTCTGACCGTCTTCCTTCTGTTTC
CCGTGGTGATCTTCGTCATCTTCAAGTTCTTGATTATGGAGCCGCTCTAC
GGAAACAGCGATGACAATGTGGGCATTGGATCCGGCGTAGCCACGGTAAT
TGTGATGCATGTCCTGGTCACGGGCTATATCCTGCGCCTGATCTTCCTTC
AAGAGATTTCGAGCATGGAGAAGCTGGAGTGGGAAGTTCTGATGCCACCA
AACACCCAAATTCATGGATCCGTGTTCATTGTCCTGCTGCTGATGTCCTA
CTGTTCCCTAATAATTGGCTTTCCCATAGCCACCTTTTTTGCCCTGAAAT
TTGTGGTGCTCAAGAGCTATGCCCATATCAATGCCGATATTATTTCGACC
ATTTGCACCGTAGTTGCAGTTCATGCAGCAGTTGGCTTTTACATCTACCG
AGCCATCTATGCAAAGAGTGTGACGGCCAAAAGCGCCAAAATATCTCTGG
CAAGCTTTCTAGACCAT
BO23384.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13829-RA | 636 | CG13829-PA | 1..633 | 17..649 | 3165 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13829-RA | 810 | CG13829-RA | 21..653 | 17..649 | 3165 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23160634..23161157 | 649..126 | 2620 | 100 | Minus |
3R | 32079331 | 3R | 23161208..23161318 | 127..17 | 555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:40:11 has no hits.
BO23384.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:24 Download gff for
BO23384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13829-RA | 21..653 | 17..651 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:04 Download gff for
BO23384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13829-RA | 21..653 | 17..651 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:17:53 Download gff for
BO23384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13829-RA | 21..653 | 17..651 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:17:53 Download gff for
BO23384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23160632..23161155 | 128..651 | 99 | <- | Minus |
3R | 23161208..23161318 | 17..127 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:04 Download gff for
BO23384.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18986354..18986877 | 128..651 | 99 | <- | Minus |
arm_3R | 18986930..18987040 | 17..127 | 100 | | Minus |
BO23384.pep Sequence
Translation from 16 to 667
> BO23384.pep
MIAKLRKIYPSGKVVSHSLAPCSTADLNNAELVSNVKKRRAEYLVERMQR
LLLFLTVFLLFPVVIFVIFKFLIMEPLYGNSDDNVGIGSGVATVIVMHVL
VTGYILRLIFLQEISSMEKLEWEVLMPPNTQIHGSVFIVLLLMSYCSLII
GFPIATFFALKFVVLKSYAHINADIISTICTVVAVHAAVGFYIYRAIYAK
SVTAKSAKISLASFLDH
BO23384.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:55:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13829-PA | 211 | CG13829-PA | 1..211 | 1..211 | 1046 | 100 | Plus |