Clone BO23386 Report

Search the DGRC for BO23386

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:86
Vector:pDNR-Dual
Associated Gene/TranscriptCG10673-RA
Protein status:BO23386.pep: Imported from assembly
Sequenced Size:706

Clone Sequence Records

BO23386.complete Sequence

706 bp assembled on 2010-03-31

GenBank Submission: KX796355

> BO23386.complete
GAAGTTATCAGTCGACATGTCCCTAGAAATCCTGAAACAAGGCGCTGAAG
GACGCCTATATTTGGGCGATTTCAAAGGAGAAGCCTGCCTGATCAAGGAG
CGGTTCGTAAAGAAGTACCGCCACCCGGAACTGAACACCCAGATCACGCG
GCAGCGCATGAAAGCGGAGGCCAAGGCATCGGGAAGATGTCTAGCCGCTG
GAATCCTGGCACCAAAGATCCTCCACTCGGACCTCAACACCCACAAGCTG
TATATGGAATATTTCGATGCAGCCAAGACTGCCAAGCAGTTCATCCAGGA
AACAGTGTCCACTCAGACGGAGGATGAAGCCAAGAAATGTCTGCTGGAGT
TCTGCACGCGGATCGGTGAAATCATTGGGAAAATGCACTCCAATCACATT
ATACATGGCGATCTCACCACATCTAACATCCTCATCAATCCGAAGGGTGG
CGACTACGATGTCATTCTGATTGACTTCGGCTTGAGCCACTACAATCAGG
CCACCGAGGACAAGGGTGTGGATCTGTACGTCCTGGAGCGGGCGCTACTC
AGTACGCACAGCGAACAGCCGTATATCTTCGAGCACGTCCTGGCCGCCTA
TCGCACAGCGTGCGGTAAGGACGAACAGGCAGTGCTCACCAAGTTCGAGG
AGGTGCGAGCACGCGGACGCAAAAGAACCATGATTGGTGCAAGCTTTCTA
GACCAT

BO23386.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:54
Subject Length Description Subject Range Query Range Score Percent Strand
Prpk-RA 675 CG10673-PA 1..672 17..688 3360 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:55
Subject Length Description Subject Range Query Range Score Percent Strand
Prpk-RA 744 CG10673-RA 42..713 17..688 3360 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:52
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 5138683..5139354 688..17 3360 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:40:53 has no hits.

BO23386.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:31 Download gff for BO23386.complete
Subject Subject Range Query Range Percent Splice Strand
CG10673-RA 1..672 17..690 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:15 Download gff for BO23386.complete
Subject Subject Range Query Range Percent Splice Strand
Prpk-RA 42..713 17..690 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:07 Download gff for BO23386.complete
Subject Subject Range Query Range Percent Splice Strand
Prpk-RA 42..713 17..690 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:07 Download gff for BO23386.complete
Subject Subject Range Query Range Percent Splice Strand
3L 5138681..5139354 17..690 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:15 Download gff for BO23386.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 5131781..5132454 17..690 99   Minus

BO23386.pep Sequence

Translation from 16 to 706

> BO23386.pep
MSLEILKQGAEGRLYLGDFKGEACLIKERFVKKYRHPELNTQITRQRMKA
EAKASGRCLAAGILAPKILHSDLNTHKLYMEYFDAAKTAKQFIQETVSTQ
TEDEAKKCLLEFCTRIGEIIGKMHSNHIIHGDLTTSNILINPKGGDYDVI
LIDFGLSHYNQATEDKGVDLYVLERALLSTHSEQPYIFEHVLAAYRTACG
KDEQAVLTKFEEVRARGRKRTMIGASFLDH

BO23386.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:55:13
Subject Length Description Subject Range Query Range Score Percent Strand
Prpk-PA 224 CG10673-PA 1..224 1..224 1158 100 Plus