BO23386.complete Sequence
706 bp assembled on 2010-03-31
GenBank Submission: KX796355
> BO23386.complete
GAAGTTATCAGTCGACATGTCCCTAGAAATCCTGAAACAAGGCGCTGAAG
GACGCCTATATTTGGGCGATTTCAAAGGAGAAGCCTGCCTGATCAAGGAG
CGGTTCGTAAAGAAGTACCGCCACCCGGAACTGAACACCCAGATCACGCG
GCAGCGCATGAAAGCGGAGGCCAAGGCATCGGGAAGATGTCTAGCCGCTG
GAATCCTGGCACCAAAGATCCTCCACTCGGACCTCAACACCCACAAGCTG
TATATGGAATATTTCGATGCAGCCAAGACTGCCAAGCAGTTCATCCAGGA
AACAGTGTCCACTCAGACGGAGGATGAAGCCAAGAAATGTCTGCTGGAGT
TCTGCACGCGGATCGGTGAAATCATTGGGAAAATGCACTCCAATCACATT
ATACATGGCGATCTCACCACATCTAACATCCTCATCAATCCGAAGGGTGG
CGACTACGATGTCATTCTGATTGACTTCGGCTTGAGCCACTACAATCAGG
CCACCGAGGACAAGGGTGTGGATCTGTACGTCCTGGAGCGGGCGCTACTC
AGTACGCACAGCGAACAGCCGTATATCTTCGAGCACGTCCTGGCCGCCTA
TCGCACAGCGTGCGGTAAGGACGAACAGGCAGTGCTCACCAAGTTCGAGG
AGGTGCGAGCACGCGGACGCAAAAGAACCATGATTGGTGCAAGCTTTCTA
GACCAT
BO23386.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:40:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prpk-RA | 675 | CG10673-PA | 1..672 | 17..688 | 3360 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:40:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prpk-RA | 744 | CG10673-RA | 42..713 | 17..688 | 3360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:40:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5138683..5139354 | 688..17 | 3360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:40:53 has no hits.
BO23386.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:31 Download gff for
BO23386.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG10673-RA | 1..672 | 17..690 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:15 Download gff for
BO23386.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prpk-RA | 42..713 | 17..690 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:07 Download gff for
BO23386.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Prpk-RA | 42..713 | 17..690 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:07 Download gff for
BO23386.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5138681..5139354 | 17..690 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:15 Download gff for
BO23386.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5131781..5132454 | 17..690 | 99 | | Minus |
BO23386.pep Sequence
Translation from 16 to 706
> BO23386.pep
MSLEILKQGAEGRLYLGDFKGEACLIKERFVKKYRHPELNTQITRQRMKA
EAKASGRCLAAGILAPKILHSDLNTHKLYMEYFDAAKTAKQFIQETVSTQ
TEDEAKKCLLEFCTRIGEIIGKMHSNHIIHGDLTTSNILINPKGGDYDVI
LIDFGLSHYNQATEDKGVDLYVLERALLSTHSEQPYIFEHVLAAYRTACG
KDEQAVLTKFEEVRARGRKRTMIGASFLDH
BO23386.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:55:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Prpk-PA | 224 | CG10673-PA | 1..224 | 1..224 | 1158 | 100 | Plus |