BO23387.complete Sequence
496 bp assembled on 2010-03-31
GenBank Submission: KX799765
> BO23387.complete
GAAGTTATCAGTCGACATGTCGTCCTACATTTCGCGTCTACTTAAGGCTC
AGTCCGCCTCCAAACGTCTGATCTCCAATTTAACCCAGCGCGACGGAAAG
CTAAGCTCTTTGCTTCGACGACTAGGTTTACAGTGGCAAGGATCAGCCGC
TGCTCCTCAACAGCGTCCCATATCCACAACTCAGGTGCAAAAGTCAGCGC
TAATTGCGGACGATCAACTGGTCACCGGGATTCAGAAGCGCGAAATGCTG
CTGGCCAAGCAGGGCTGCGAGGACCCTTGGGGTTTCAGCAAGGTGATCAG
GCGCGGATCGGGAAGGGAGAACGACCCCACCGTCGTGCCATCGGCGTTCG
ATGCACGCCTCGTAGGCTGTCTGTGCCTGGATGACCGCTTGCCCAAGTGG
ATGTGGATTGAGAAGGACGAGGGACCGAAGCGGTGCGAGTGCGGCCACTA
CTTCATCCTCAAGAATGTCCCACCCGTTGCAAGCTTTCTAGACCAT
BO23387.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:41:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11043-RA | 465 | CG11043-PA | 1..462 | 17..478 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:41:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11043-RA | 647 | CG11043-RA | 101..562 | 17..478 | 2310 | 100 | Plus |
| CG9596-RC | 2175 | CG9596-RC | 1553..1835 | 478..196 | 1415 | 100 | Minus |
| CG9596-RC | 2175 | CG9596-RC | 1890..2070 | 197..17 | 905 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:41:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6559766..6560048 | 196..478 | 1415 | 100 | Plus |
| 2L | 23513712 | 2L | 6559531..6559711 | 17..197 | 905 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:41:39 has no hits.
BO23387.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:32 Download gff for
BO23387.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11043-RA | 101..562 | 17..480 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:56:26 Download gff for
BO23387.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11043-RA | 101..562 | 17..480 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:18:21 Download gff for
BO23387.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11043-RA | 101..562 | 17..480 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:18:21 Download gff for
BO23387.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6559531..6559711 | 17..197 | 100 | -> | Plus |
| 2L | 6559768..6560048 | 198..480 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:56:26 Download gff for
BO23387.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6559531..6559711 | 17..197 | 100 | -> | Plus |
| arm_2L | 6559768..6560048 | 198..480 | 99 | | Plus |
BO23387.pep Sequence
Translation from 16 to 496
> BO23387.pep
MSSYISRLLKAQSASKRLISNLTQRDGKLSSLLRRLGLQWQGSAAAPQQR
PISTTQVQKSALIADDQLVTGIQKREMLLAKQGCEDPWGFSKVIRRGSGR
ENDPTVVPSAFDARLVGCLCLDDRLPKWMWIEKDEGPKRCECGHYFILKN
VPPVASFLDH
BO23387.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:55:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11043-PA | 154 | CG11043-PA | 1..154 | 1..154 | 807 | 100 | Plus |
| CoVb-PB | 120 | CG11015-PB | 1..114 | 29..148 | 223 | 41.8 | Plus |
| CoVb-PA | 120 | CG11015-PA | 1..114 | 29..148 | 223 | 41.8 | Plus |
