Clone BO23388 Report

Search the DGRC for BO23388

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:88
Vector:pDNR-Dual
Associated Gene/TranscriptCG11697-RA
Protein status:BO23388.pep: Imported from assembly
Sequenced Size:754

Clone Sequence Records

BO23388.complete Sequence

754 bp assembled on 2010-03-31

GenBank Submission: KX795334

> BO23388.complete
GAAGTTATCAGTCGACATGATTTATGCGATCGTGATACACATACTGTCCC
TTCTGGTGGGCTGTTTCTATCCAGCATTCGCGTCCTACAAGATCCTGAAA
AGTCAGAATTGTAGCGTCAATGATCTTCGCGGATGGTTAATCTACTGGAT
TGCCTATGGAGTTTATGTGGCCTTTGATTATTTCACAGCGGGTCTGCTGG
CATTTATTCCATTGCTAAGTGAGTTCAAGGTGCTTCTCCTGTTCTGGATG
TTGCCCTCTGTGGGCGGCGGCAGTGAGGTGATCTACGAGGAGTTCCTGCG
ATCCTTTAGCTGTAACGAATCCTTCGACCAGGTCCTGGGACGTATCACCT
TGGAATGGGGCGAATTGGTGTGGCAACAAGTTTGCTCCGTTCTTAGCCAT
TTGATGGTTTTGGCAGATCGCTATCTCCTGCCCAGCGGTCATCGTCCTGC
CCTCCAAATAACGCCCAGCATCGAGGATCTGGTCAACGATGCCATAGCCA
AAAGGCAGTTGGAAGAGAAGCGGAAACAGATGGGTAACTTATCTGATACC
ATCAACGAGGTTTTGGGAGAAAATATCGATTTAAATATGGATCTGCTGCA
CGGATCCGAATCTGATTTATTGGTTATTAAGGAGCCTATTTCCAAGCCCA
AGGAGAGACCAATACCGCCGCCGAAGCCAATGCGTCAGCCATCATCAAGC
AACCAGCAAGAAATGAATCTTTCGTCGCAGTTTATGGCAAGCTTTCTAGA
CCAT

BO23388.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:30:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG11697-RA 723 CG11697-PA 1..720 17..736 3600 100 Plus
CG11697-RB 669 CG11697-PB 260..666 330..736 2035 100 Plus
CG11697-RB 669 CG11697-PB 1..263 17..279 1315 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:30:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG11697-RA 934 CG11697-RA 96..815 17..736 3600 100 Plus
CG11697-RB 880 CG11697-RB 355..761 330..736 2035 100 Plus
CG11697-RB 880 CG11697-RB 96..358 17..279 1315 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:30:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11572802..11573521 17..736 3600 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:30:17 has no hits.

BO23388.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:59 Download gff for BO23388.complete
Subject Subject Range Query Range Percent Splice Strand
CG11697-RA 1..720 17..738 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:57 Download gff for BO23388.complete
Subject Subject Range Query Range Percent Splice Strand
CG11697-RA 96..815 17..738 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:25 Download gff for BO23388.complete
Subject Subject Range Query Range Percent Splice Strand
CG11697-RA 96..815 17..738 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:25 Download gff for BO23388.complete
Subject Subject Range Query Range Percent Splice Strand
X 11572802..11573521 17..738 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:57 Download gff for BO23388.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11466835..11467554 17..738 99   Plus

BO23388.pep Sequence

Translation from 16 to 754

> BO23388.pep
MIYAIVIHILSLLVGCFYPAFASYKILKSQNCSVNDLRGWLIYWIAYGVY
VAFDYFTAGLLAFIPLLSEFKVLLLFWMLPSVGGGSEVIYEEFLRSFSCN
ESFDQVLGRITLEWGELVWQQVCSVLSHLMVLADRYLLPSGHRPALQITP
SIEDLVNDAIAKRQLEEKRKQMGNLSDTINEVLGENIDLNMDLLHGSESD
LLVIKEPISKPKERPIPPPKPMRQPSSSNQQEMNLSSQFMASFLDH

BO23388.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:46:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG11697-PA 240 CG11697-PA 1..240 1..240 1246 100 Plus
CG11697-PB 222 CG11697-PB 1..222 1..240 1122 92.5 Plus
CG42678-PG 288 CG30193-PG 1..163 1..155 170 28.1 Plus
CG42678-PE 288 CG30193-PE 1..163 1..155 170 28.1 Plus
CG42678-PS 312 CG42678-PS 1..92 1..94 167 31.9 Plus