Clone BO23391 Report

Search the DGRC for BO23391

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:233
Well:91
Vector:pDNR-Dual
Associated Gene/TranscriptCG12343-RA
Protein status:BO23391.pep: Imported from assembly
Sequenced Size:712

Clone Sequence Records

BO23391.complete Sequence

712 bp assembled on 2010-03-31

GenBank Submission: KX798148

> BO23391.complete
GAAGTTATCAGTCGACATGGAAAAGACGAAAACGGCTGCCGAAAAATTGG
CGGAGCGCAAGGCGCGTTTGCTGGACCTACACAAGAAGCGCCAGGAGGCG
CGTACGGACAACCACCAGGAAGTGGTGGCAGAGGACGCTCGCAAGAAGCT
CCCCAAGAACTGGGAGGCTCGCAAGCGACAGGCGGAATGGATACTAGCGG
ACGACAAGGCGCGAGCCGAGGCGCAGGCAGCTGGCAAGGATTACGAGCGT
TTGAAGCTTTTGGAGGTATCCGCTGTGGATGCGGATCGCATTGAGAAAAA
GAAGAAGCGTAAAGACAATCCAGATCTTGGTTTCTCCACATACGAAGCTC
AAACAGCTAGACAGTACAACCGATTGGTCAAGAGTATGCCTGCTCGCGAT
TTGGAAAAGTACGAGCGCCAGAAGGAGGAACTCGGTGACGCCTTCTACGG
TGGAGCACACACCACTTTGCATTCGAGGACGAAGGACACTCCAGGTGCTA
TTAACAAAATGGTAACAGACCTGGAGCAGCAGATAGAGCGCCGCAAGAAG
TACTCTCGCAGGAGGATCTACAACGACGATGCGGATGTGGACTTCATCAA
CGAGAGGAATTCCAAGTTCAACAAAAAGCTGGACCGCTTCTACAGCGAGC
ATACAGCCGAGATCAAACAAAATTTGGAGCGGGGAACAGCTATTGCAAGC
TTTCTAGACCAT

BO23391.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:30:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG12343-RA 681 CG12343-PA 1..678 17..694 3390 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:30:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG12343-RA 973 CG12343-RA 110..787 17..694 3390 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:30:32
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 10822586..10823263 694..17 3390 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:30:33 has no hits.

BO23391.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:00 Download gff for BO23391.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 59..736 17..696 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:01 Download gff for BO23391.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 110..787 17..696 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:33 Download gff for BO23391.complete
Subject Subject Range Query Range Percent Splice Strand
CG12343-RA 110..787 17..696 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:33 Download gff for BO23391.complete
Subject Subject Range Query Range Percent Splice Strand
2R 10822584..10823263 17..696 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:01 Download gff for BO23391.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 6710089..6710768 17..696 99   Minus

BO23391.pep Sequence

Translation from 16 to 712

> BO23391.pep
MEKTKTAAEKLAERKARLLDLHKKRQEARTDNHQEVVAEDARKKLPKNWE
ARKRQAEWILADDKARAEAQAAGKDYERLKLLEVSAVDADRIEKKKKRKD
NPDLGFSTYEAQTARQYNRLVKSMPARDLEKYERQKEELGDAFYGGAHTT
LHSRTKDTPGAINKMVTDLEQQIERRKKYSRRRIYNDDADVDFINERNSK
FNKKLDRFYSEHTAEIKQNLERGTAIASFLDH

BO23391.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:46:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG12343-PA 226 CG12343-PA 1..226 1..226 1157 100 Plus