BO23393.complete Sequence
622 bp assembled on 2010-03-31
GenBank Submission: KX795835
> BO23393.complete
GAAGTTATCAGTCGACATGTCTGCAGCCAACATGCCGACGACAACAGGAG
CTCAGGGATCGGGAAACCAAGTTCCCACAACTAGCACTACGATTGTAAAC
CACTTCCGGGAGTTGATCAAGGAACCGAAGAACCTCGACGAGGCGGCCAA
CTATCTGTACCAGTCGCTGCTCGACGACGCCGTAGTCGGAATCTTTAACG
AGACACATCATCTGCGAAAGTCAGGGAATCTGGCCGCCCTGGACGGAGTG
CCGGAGGACTCAACCTATCGAATGTGCGAGATGCCCAACCTGGACATATT
CGGCATCTCAACGGCCAAAAAGCCAATGGACTGCACCTGCCCCAACTGTG
ATCGCCTGGTGGCCGCCGCCCGCTTCGCCCCGCACCTGGAAAAGTGCATG
GGCATGGGTCGTATCTCGTCGCGAATTGCCTCTCGTCGCTTGGCCACCAA
AGAGGGCGCCACATCCGCCCACCTGCACTCTTCGGGAAATACCGGAGGCA
CTGATGATGAGGATGACGTGGACTGGTCGTCCGACAAGCGTCGAAAGAAA
TCAAACCAGAACTCAAGGAACAACGGCTCCAAGAAGAACAATGGCAAAAC
CTTTGCAAGCTTTCTAGACCAT
BO23393.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:31:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sgf11-RB | 591 | CG13379-PB | 1..588 | 17..604 | 2940 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:31:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sgf11-RB | 800 | CG13379-RB | 149..736 | 17..604 | 2940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:31:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 18681101..18681688 | 604..17 | 2940 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:31:01 has no hits.
BO23393.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:01 Download gff for
BO23393.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sgf11-RB | 103..690 | 17..606 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:08 Download gff for
BO23393.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sgf11-RB | 149..736 | 17..606 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:45 Download gff for
BO23393.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sgf11-RB | 149..736 | 17..606 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:45 Download gff for
BO23393.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 18681099..18681688 | 17..606 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:08 Download gff for
BO23393.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 18674199..18674788 | 17..606 | 99 | | Minus |
BO23393.pep Sequence
Translation from 16 to 622
> BO23393.pep
MSAANMPTTTGAQGSGNQVPTTSTTIVNHFRELIKEPKNLDEAANYLYQS
LLDDAVVGIFNETHHLRKSGNLAALDGVPEDSTYRMCEMPNLDIFGISTA
KKPMDCTCPNCDRLVAAARFAPHLEKCMGMGRISSRIASRRLATKEGATS
AHLHSSGNTGGTDDEDDVDWSSDKRRKKSNQNSRNNGSKKNNGKTFASFL
DH
BO23393.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:46:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sgf11-PB | 196 | CG13379-PB | 1..196 | 1..196 | 1034 | 100 | Plus |