BO23496.complete Sequence
685 bp assembled on 2010-03-31
GenBank Submission: KX799516
> BO23496.complete
GAAGTTATCAGTCGACATGAGGGTCTACTTGTATCAAATGCGCCCGGTGC
TCTTTCTCTTCTACATGGTGGAGACGACGGCCAACTTATTCGTTTTGTAC
TACCAACTGAAAGCATTTGTTTTCGTCAATCTGACAACGATGAAATGGGA
AGATGTTCTAATCCAAAGCTTTTATATGTCCTTCTTTTACATATTCACAG
TGGTAACGCTCTTTGCCAGCATAAATCTCTGCACCGGTCATCGCACATCG
ATCGTTGAGGAAGTTGTGCGTCCTCTGATCGGATTTGTTCTATATACGGT
AATATCGTTGATGGCACTGGGCGATGCCGAGACGGATTTCTATATATGGT
ATGATGGAAGGAACCCGGATGATTTACTATATCCGGAGAAGCCGCTCCAT
CCGTTCTTCGGTAGCCTGCGGGACCAGGCGACAGCCTCATTGGTGTCCAG
TGTTATCTATCTGCTGCACTGCCTCATTGCGTTGGATGTCCTTCTGTCGA
ATGACGATTCGGATAACGAACGCGAGTCATCCAATTCCTCCGACGATGTG
AACGAAGAGGTCGACTACGTTCCAGTGCGTCTGTACGTCTTTGGCGGCGT
GATGCAACGCTGGCTGGAGCAGTTCGACTGGTTTCAGGACTTTACCCACA
GTGGAGTCACAGATATCGCAAGCTTTCTAGACCAT
BO23496.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:31:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14315-RA | 654 | CG14315-PA | 1..651 | 17..667 | 3255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:31:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14315-RA | 771 | CG14315-RA | 70..720 | 17..667 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:31:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18158770..18159420 | 17..667 | 3255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:31:29 has no hits.
BO23496.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:28:03 Download gff for
BO23496.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14315-RA | 1..651 | 17..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:15 Download gff for
BO23496.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14315-RA | 70..720 | 17..669 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:55 Download gff for
BO23496.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14315-RA | 70..720 | 17..669 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:55 Download gff for
BO23496.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18158770..18159420 | 17..669 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:15 Download gff for
BO23496.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13984492..13985142 | 17..669 | 99 | | Plus |
BO23496.pep Sequence
Translation from 16 to 685
> BO23496.pep
MRVYLYQMRPVLFLFYMVETTANLFVLYYQLKAFVFVNLTTMKWEDVLIQ
SFYMSFFYIFTVVTLFASINLCTGHRTSIVEEVVRPLIGFVLYTVISLMA
LGDAETDFYIWYDGRNPDDLLYPEKPLHPFFGSLRDQATASLVSSVIYLL
HCLIALDVLLSNDDSDNERESSNSSDDVNEEVDYVPVRLYVFGGVMQRWL
EQFDWFQDFTHSGVTDIASFLDH
BO23496.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:46:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14315-PA | 217 | CG14315-PA | 1..217 | 1..217 | 1137 | 100 | Plus |
| CG34433-PA | 233 | CG34433-PA | 31..230 | 8..214 | 377 | 34.6 | Plus |
| CG34433-PB | 212 | CG34433-PB | 31..209 | 8..214 | 295 | 29.4 | Plus |
| CG34432-PA | 213 | CG34432-PA | 20..213 | 8..217 | 220 | 24.9 | Plus |
