Clone BO23509 Report

Search the DGRC for BO23509

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:235
Well:9
Vector:pDNR-Dual
Associated Gene/TranscriptCG32945-RA
Protein status:BO23509.pep: Imported from assembly
Sequenced Size:532

Clone Sequence Records

BO23509.complete Sequence

532 bp assembled on 2010-04-13

GenBank Submission: KX796656

> BO23509.complete
GAAGTTATCAGTCGACATGGGTGCTGGGAACAGCAAGCCGCAAACGGTGC
AGATTGAAAATCCAACGGCATTTGAGATTACTCGGGATGTGGTAGATAGA
ATAAAGCAGGCCACCGTCATAAGTACTGAACTCGGATCTACCACCTGTGA
AGCGTGTAAGCAAAAACCAATAAAAGAATCGTGTTCCGATATACGTACTC
CGATGGAACATAAGCAGCATAATGTGAGTGCCTTACATCCAGTTCCGGTG
GCCAAGTCCTGGAAGAAGCGTTCTTTGGAAGTCGAGGAAAAAGAGTTCGG
AAAATCCTTAAAATTGGTTCAAGAACTATTCGGTACGCCTGTAAAATGGG
CCAAGGATTGCGAGGGCGAGATCGAAAAATTCGAGGAAGAGCTGGTTCAC
TGCTATCAACGGTTTCCAAACGAACCCCTTCAGTGCTCTAATTTGGCCAG
ACAGTATCACCGATTCGTATTCGCCAAACAGTATGCCGAATTATCGAAAA
CCAATACATGTACTGCAAGCTTTCTAGACCAT

BO23509.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:25:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG32945-RA 501 CG32945-PA 1..498 17..514 2490 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:25:13
Subject Length Description Subject Range Query Range Score Percent Strand
CG32945-RA 706 CG32945-RA 49..549 14..514 2505 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:25:09
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 4578096..4578596 514..14 2505 100 Minus
Blast to na_te.dros performed on 2014-11-27 10:25:10 has no hits.

BO23509.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:52 Download gff for BO23509.complete
Subject Subject Range Query Range Percent Splice Strand
CG32945-RA 1..498 17..516 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:08:34 Download gff for BO23509.complete
Subject Subject Range Query Range Percent Splice Strand
CG32945-RA 52..549 17..516 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:21:20 Download gff for BO23509.complete
Subject Subject Range Query Range Percent Splice Strand
CG32945-RA 52..549 17..516 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:21:20 Download gff for BO23509.complete
Subject Subject Range Query Range Percent Splice Strand
3R 4578094..4578593 17..516 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:08:34 Download gff for BO23509.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 403816..404315 17..516 99   Minus

BO23509.pep Sequence

Translation from 16 to 532

> BO23509.pep
MGAGNSKPQTVQIENPTAFEITRDVVDRIKQATVISTELGSTTCEACKQK
PIKESCSDIRTPMEHKQHNVSALHPVPVAKSWKKRSLEVEEKEFGKSLKL
VQELFGTPVKWAKDCEGEIEKFEEELVHCYQRFPNEPLQCSNLARQYHRF
VFAKQYAELSKTNTCTASFLDH

BO23509.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:18:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG32945-PA 166 CG32945-PA 1..166 1..166 882 100 Plus