BO23511.complete Sequence
475 bp assembled on 2010-04-13
GenBank Submission: KX794381
> BO23511.complete
GAAGTTATCAGTCGACATGATTGGAGTCTCGGGAACTTTCAAGGTGCTGG
CGGCCATATCGGGTATACTCTTCATGGGCTATTGCGTATATTTCGACAAA
CAGCGTCGGAGTGATCCAGATTTCAAGAGGAAGTTGCACGAGCGCAGGAT
TCAACGCTCATTGGCATCCGTGAAGTCCACGGCATCGGTTTCCATGAGCG
AGCGGGACGTCGAAGTGTACTTCATGACCCAGATACACAAGGGCGAGACC
CTGATCACAAACGGCGATGTTGAGGCCGGCGTGGAGCATCTAATCAACGC
GATACTCGTCTGCGGCCAGCCGTCAAAACTGTTGCAGTTGCTCCAGAGCA
CCTTGCCCATGGATATTTTCACCACAATGCTGATCAAGATGCACGCCTAC
GAGGCCTCGCAGCGCTGTTTGCCTGTTTTAGTGGATGATGAGGCTACCAG
TAGCCTTGCAAGCTTTCTAGACCAT
BO23511.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:25:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tomboy20-RA | 444 | CG14690-PA | 1..441 | 17..457 | 2205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:25:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tomboy20-RA | 681 | CG14690-RA | 106..546 | 17..457 | 2205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:25:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 10735412..10735852 | 457..17 | 2205 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:25:35 has no hits.
BO23511.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:53 Download gff for
BO23511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tomboy20-RA | 106..546 | 17..459 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:08:42 Download gff for
BO23511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tomboy20-RA | 106..546 | 17..459 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:21:32 Download gff for
BO23511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
tomboy20-RA | 106..546 | 17..459 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:21:32 Download gff for
BO23511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 10735409..10735852 | 17..459 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:08:42 Download gff for
BO23511.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 6561131..6561574 | 17..459 | 99 | | Minus |
BO23511.pep Sequence
Translation from 16 to 475
> BO23511.pep
MIGVSGTFKVLAAISGILFMGYCVYFDKQRRSDPDFKRKLHERRIQRSLA
SVKSTASVSMSERDVEVYFMTQIHKGETLITNGDVEAGVEHLINAILVCG
QPSKLLQLLQSTLPMDIFTTMLIKMHAYEASQRCLPVLVDDEATSSLASF
LDH
BO23511.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:13:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
tomboy20-PA | 147 | CG14690-PA | 1..147 | 1..147 | 738 | 100 | Plus |
Tom20-PB | 171 | CG7654-PB | 11..130 | 10..128 | 328 | 47.5 | Plus |
Tom20-PA | 171 | CG7654-PA | 11..130 | 10..128 | 328 | 47.5 | Plus |