BO23512.complete Sequence
499 bp assembled on 2010-04-13
GenBank Submission: KX796401
> BO23512.complete
GAAGTTATCAGTCGACATGTCCTTTGTGTTGCAATTGGCCACCAGGACAG
TACGAAGTACCATTGCTCAGGTGCGTGGCGTAGCCACCACAATGCCAAGG
CAAATTAAAGAGATTCATGAGAAGCAGGAGAACAGTGTAAAGATCTTCGA
GGGCGTTAATGTGGAATCGCCGCGTGCTCACCTGATGCTTAAATCCGCCT
GCCAGACCAAGTTTTGCCCGGAATGCACCTTGGGCCTGGACATCAAGCAC
ACGGATGTGCTAATCCTGTCGCAGTATGTCCGTTCCGACGGCTGTATGCT
GCCCAGAAGGATCACCGGACTTTGCCACCGGCAACAAAAGAAGATGGGCA
CTCTGGTAACCATGGCTCAGAAGGCGGGACTGATGCCAAATCTGGCGCCC
GAGTGGAGTAAAAGAGATCCCAAGAAGCGCTTCGGCTGGCGCAAGTTCAA
CAAGTACTTCCTGGAGTCCACAATTAAATACGCAAGCTTTCTAGACCAT
BO23512.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:25:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS18A-RA | 468 | CG31450-PA | 1..465 | 17..481 | 2310 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:25:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS18A-RA | 581 | CG31450-RA | 84..550 | 15..481 | 2320 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:25:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8561948..8562315 | 481..114 | 1840 | 100 | Minus |
3R | 32079331 | 3R | 8562412..8562510 | 113..15 | 480 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:25:51 has no hits.
BO23512.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:54 Download gff for
BO23512.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS18A-RA | 76..540 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:08:49 Download gff for
BO23512.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS18A-RA | 86..550 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:21:40 Download gff for
BO23512.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS18A-RA | 86..550 | 17..483 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:21:40 Download gff for
BO23512.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8561946..8562315 | 114..483 | 99 | <- | Minus |
3R | 8562412..8562508 | 17..113 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:08:49 Download gff for
BO23512.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4388134..4388230 | 17..113 | 98 | | Minus |
arm_3R | 4387668..4388037 | 114..483 | 99 | <- | Minus |
BO23512.pep Sequence
Translation from 16 to 499
> BO23512.pep
MSFVLQLATRTVRSTIAQVRGVATTMPRQIKEIHEKQENSVKIFEGVNVE
SPRAHLMLKSACQTKFCPECTLGLDIKHTDVLILSQYVRSDGCMLPRRIT
GLCHRQQKKMGTLVTMAQKAGLMPNLAPEWSKRDPKKRFGWRKFNKYFLE
STIKYASFLDH
BO23512.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:18:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS18A-PA | 155 | CG31450-PA | 1..155 | 1..155 | 812 | 100 | Plus |