BO23514.complete Sequence
568 bp assembled on 2010-04-13
GenBank Submission: KX799174
> BO23514.complete
GAAGTTATCAGTCGACATGCGATACATAAAGTCGGAGCCGTACTATGAAG
GGCTTCCTCCATTCAATGTCAGCGGCAGCCCGTTCAATGTGGTTCCCATT
CACAACTACCCGGAGCTTATGAAAGACACTTGCGCCCTAATCAACGCAGA
GTGGCCACGATCGGAAACGGCGCGCATGCGCTCCCTGGAGGCCTCCTGTG
ACAGCCTACCCTGCAGCCTGGTGCTGACCACCGAGGGAATGTGCCGCGTG
ATCGCTCACCTCAAGCTCAGCCCGATCAATTCCAAGAAGAAGGCCTGCTT
CGTCGAGTCCGTGGTGGTGGACAAGCGGCACCGTGGCCAGGGATTCGGCA
AGCTGATCATGAAGTTCGCCGAGGACTATTGCCGCGTCGTGCTGGACCTC
AAGACCATATATCTGTCCACCATCGACCAGGATGGATTCTACGAACGCAT
TGGCTACGAGTACTGCGCTCCCATTACAATGTATGGGCCGCGCCACTGTG
AGCTGCCCAGCTTGCAAAATGCCAAAAAGAAATACATGAAGAAGGTCTTA
GCAAGCTTTCTAGACCAT
BO23514.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:26:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-RB | 537 | CG8481-PB | 1..534 | 17..550 | 2670 | 100 | Plus |
| CG8481-RA | 507 | CG8481-PA | 4..504 | 50..550 | 2505 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:26:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-RB | 1506 | CG8481-RB | 369..902 | 17..550 | 2670 | 100 | Plus |
| CG8481-RA | 1412 | CG8481-RA | 308..808 | 50..550 | 2505 | 100 | Plus |
| MED6-RB | 1758 | CG9473-RB | 1..62 | 111..50 | 310 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:26:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9768923..9769423 | 50..550 | 2505 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:26:49 has no hits.
BO23514.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:55 Download gff for
BO23514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RB | 352..885 | 17..552 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:11:00 Download gff for
BO23514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RB | 369..902 | 17..552 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:22:03 Download gff for
BO23514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8481-RB | 369..902 | 17..552 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:22:03 Download gff for
BO23514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9768806..9768838 | 17..49 | 100 | -> | Plus |
| 3R | 9768923..9769423 | 50..552 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:11:00 Download gff for
BO23514.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5594528..5594560 | 17..49 | 100 | -> | Plus |
| arm_3R | 5594645..5595145 | 50..552 | 99 | | Plus |
BO23514.pep Sequence
Translation from 16 to 568
> BO23514.pep
MRYIKSEPYYEGLPPFNVSGSPFNVVPIHNYPELMKDTCALINAEWPRSE
TARMRSLEASCDSLPCSLVLTTEGMCRVIAHLKLSPINSKKKACFVESVV
VDKRHRGQGFGKLIMKFAEDYCRVVLDLKTIYLSTIDQDGFYERIGYEYC
APITMYGPRHCELPSLQNAKKKYMKKVLASFLDH
BO23514.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:12:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8481-PB | 178 | CG8481-PB | 1..178 | 1..178 | 954 | 100 | Plus |
| CG8481-PA | 168 | CG8481-PA | 2..168 | 12..178 | 893 | 100 | Plus |
