BO23515.complete Sequence
646 bp assembled on 2010-04-13
GenBank Submission: KX793899
> BO23515.complete
GAAGTTATCAGTCGACATGGATAGTAATGATTCAGGAACAGCAGATGCGA
ATTCTGCACGGCAGTCGCTTGCGTTGCGGCGGGAATTGCGCAGAAAGAAA
ATATTGGAAGCGTCCAAGGCACGACTGGACAAATTGAATAGCAGATCGAC
GTCGGCGTTTCAGAATGAAAACCTCGATGGTGAACCCTCAAATACGCAAT
ATTCCGATCCGGAGGTGGAGCCGGATATTCCAATAAGGCGTTCATTTCTG
CCAGAACAACCTGCGCCCCAAAGAACCACGTCACGAAATGCATTTCTTAA
GAGCAGAGTTCACATTATTTTGGCGGCTTGCTTTGGATTTCTTTTGGCTC
TTTACACGAACACCAGTGTTTTCATTCCCGTTCTGCTTTTTGTGATTGCA
GAGCTTGCATTTCTGCAGAATTACAAAGAAGACCATTTACCGGCCAGCAT
GGGACCCTTGTTACTTATGTTCATCAATCCGAATATTACCAGCAAAATTA
AGCAGTTTAGCAGTATATTTTTTATTCTTCAGTCATTGTTGGGTGATCTT
GCGATAACCGTTTGTGTTGTTTGTTCAGGAAGCATGCTCTTACTAAATTT
TAGACCCGAATATGCTACAATTGTTAAAGCAAGCTTTCTAGACCAT
BO23515.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:27:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)SH0834-RA | 615 | CG5385-PA | 1..612 | 17..628 | 3030 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:27:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)SH0834-RA | 936 | CG5385-RA | 42..653 | 17..628 | 3030 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:27:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 10311333..10311785 | 628..176 | 2250 | 99.8 | Minus |
2L | 23513712 | 2L | 10311899..10312058 | 176..17 | 785 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:27:14 has no hits.
BO23515.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:59 Download gff for
BO23515.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5385-RA | 12..623 | 17..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:11:51 Download gff for
BO23515.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5385-RA | 42..653 | 17..630 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:22:15 Download gff for
BO23515.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)SH0834-RA | 42..653 | 17..630 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:22:15 Download gff for
BO23515.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 10311331..10311784 | 177..630 | 99 | <- | Minus |
2L | 10311899..10312058 | 17..176 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:11:51 Download gff for
BO23515.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 10311331..10311784 | 177..630 | 99 | <- | Minus |
arm_2L | 10311899..10312058 | 17..176 | 99 | | Minus |
BO23515.pep Sequence
Translation from 16 to 646
> BO23515.pep
MDSNDSGTADANSARQSLALRRELRRKKILEASKARLDKLNSRSTSAFQN
ENLDGEPSNTQYSDPEVEPDIPIRRSFLPEQPAPQRTTSRNAFLKSRVHI
ILAACFGFLLALYTNTSVFIPVLLFVIAELAFLQNYKEDHLPASMGPLLL
MFINPNITSKIKQFSSIFFILQSLLGDLAITVCVVCSGSMLLLNFRPEYA
TIVKASFLDH
BO23515.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:14:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)SH0834-PA | 204 | CG5385-PA | 1..204 | 1..204 | 1021 | 100 | Plus |