BO23519.complete Sequence
673 bp assembled on 2010-04-13
GenBank Submission: KX794014
> BO23519.complete
GAAGTTATCAGTCGACATGCATCATCACCAGAATCTCGGAGACGCGGCCG
CCATGAATGGAATGATCCCGCCATACGAAGCCATGGCTATGTACGAGCAG
CCCAAGCCCAGATTCATCTTCAAGATGCCCCGCGTGGTGCCTGACCAGAG
GTCCAAGTTCGATAGCGACGAGCTCTTCCGCCGATTGAGTAGGGAGAGCG
AGGTTCGCTACACAGGATACCGGGAACGTGCAATGGAGGAGCGCAGGATG
CGGTTTGTCAACGACTGCCGCAAGGGCTATGCGGAGATATCGATGGTAGC
TTCAGGAACTAATCTGCAGCTCTACTTCAACGCCAACCACAATCCGTACG
CCCAGGAGCAGGATTGCGATTTCGAGCGGGAGCGGGGCAAAGTTCATTTG
CGTTCTAGTTTCATCATGAACGGGGTGTGCGTCCGCTTCCGGGGCTGGGT
GGATCTGGACCGACTGGATGGCGCTGCCTGCCTGGAGTTCGATGAACAAC
GAGCCCAGCAGGAGGATGCTCAGCTGCAGGAGCAGATTCAAAGCTACAAC
CAGCGCATGGCTGAGTCCAGGAGAATCTACCACACGCCCCAGACTCCACC
CGAGGATCACCATCACAGAGGTGGGCCTGGTCTGCCTAGAGGACCAATGG
GATGGGCAAGCTTTCTAGACCAT
BO23519.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:27:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bro-RA | 642 | CG7960-PA | 1..639 | 17..655 | 3195 | 100 | Plus |
| Bgb-RB | 762 | CG7959-PB | 53..518 | 90..555 | 425 | 72.7 | Plus |
| Bgb-RA | 642 | CG7959-PA | 53..518 | 90..555 | 425 | 72.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:27:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bro-RA | 744 | CG7960-RA | 34..675 | 14..655 | 3210 | 100 | Plus |
| Bgb-RB | 1242 | CG7959-RB | 337..802 | 90..555 | 425 | 72.7 | Plus |
| Bgb-RA | 1242 | CG7959-RA | 337..802 | 90..555 | 425 | 72.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:27:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1647902..1648543 | 14..655 | 3210 | 100 | Plus |
| 3L | 28110227 | 3L | 1640047..1640512 | 90..555 | 425 | 72.7 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:27:53 has no hits.
BO23519.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:59 Download gff for
BO23519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bro-RA | 37..675 | 17..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:11:58 Download gff for
BO23519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bro-RA | 37..675 | 17..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:22:35 Download gff for
BO23519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Bro-RA | 37..675 | 17..657 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:22:35 Download gff for
BO23519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1647905..1648543 | 17..657 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:11:58 Download gff for
BO23519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1647905..1648543 | 17..657 | 99 | | Plus |
BO23519.pep Sequence
Translation from 16 to 673
> BO23519.pep
MHHHQNLGDAAAMNGMIPPYEAMAMYEQPKPRFIFKMPRVVPDQRSKFDS
DELFRRLSRESEVRYTGYRERAMEERRMRFVNDCRKGYAEISMVASGTNL
QLYFNANHNPYAQEQDCDFERERGKVHLRSSFIMNGVCVRFRGWVDLDRL
DGAACLEFDEQRAQQEDAQLQEQIQSYNQRMAESRRIYHTPQTPPEDHHH
RGGPGLPRGPMGWASFLDH
BO23519.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:16:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Bro-PA | 213 | CG7960-PA | 1..213 | 1..213 | 1159 | 100 | Plus |
| Bgb-PB | 253 | CG7959-PB | 5..216 | 11..218 | 691 | 62 | Plus |
| Bgb-PA | 213 | CG7959-PA | 5..198 | 11..202 | 684 | 65.1 | Plus |
