BO23520.complete Sequence
712 bp assembled on 2010-04-13
GenBank Submission: KX798974
> BO23520.complete
GAAGTTATCAGTCGACATGGCGACAAGGTCTTGTGCGTACAAGGACTGTG
AATACTATTACGTAGGCCACGAAAACGCGCTGACCAAAGGAAGAACCCTG
TTTGCCTTTCCCAAACAACCGCAAAGGGCGAGAATCTGGCACGAAAACGG
CCAAGTGCATCCAAAGATTCCCCATAGCCAGCTTTTTATGTGCTCCCTTC
ACTTTGACCGCAAGTTCATATCCTCCTCTAAGAACCGAACGCTCCTCGTC
GGCGAGGCAGTGCCGTTTCCGTACGAGGAAAGCAGTAGCAAGCCGGAGGA
GGAGCCCCAACAAGTGGCTTCCACTTCGCATGAGAGCTACTATATAAACC
TGAGCGACGATGAGCTCAGCATCAACAATGTGGACACTACCTCAGTTACT
ACAATTGACGCAGTCCACGATAGTCCACCGCAGAAGCGCCCGAAGGAATC
TTCCATTGTCATTGCTCTAAAGGAAGCTGTGAAAATGGAACCCAATCCGA
ATGCAGGCCGAGTTAGAGCAGAACCCGACAATATAGATACTACTGAAGTG
TCTGTGTTCAACTTCAAGGGACAGGAGTACGTACAAATGTCTATGGAGTA
TTACTTGCAGGAAAAGCGGAAAATGGCTAAACTTTTGCAAGACTATAAAA
ATGCTTTAAGAAGCATTAAGAAACATATTTCCCACCTTGACCTTGCAAGC
TTTCTAGACCAT
BO23520.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:28:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dip2-RA | 681 | CG9771-PA | 1..678 | 17..694 | 3390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:28:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dip2-RA | 903 | CG9771-RA | 88..765 | 17..694 | 3390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:28:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4645181..4645568 | 404..17 | 1940 | 100 | Minus |
3R | 32079331 | 3R | 4644787..4645076 | 694..405 | 1450 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:28:15 has no hits.
BO23520.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:00 Download gff for
BO23520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dip2-RA | 27..704 | 17..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:12:04 Download gff for
BO23520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dip2-RA | 88..765 | 17..696 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:22:44 Download gff for
BO23520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Dip2-RA | 88..765 | 17..696 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:22:44 Download gff for
BO23520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4644785..4645076 | 405..696 | 99 | <- | Minus |
3R | 4645181..4645568 | 17..404 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:12:04 Download gff for
BO23520.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 470507..470798 | 405..696 | 99 | <- | Minus |
arm_3R | 470903..471290 | 17..404 | 100 | | Minus |
BO23520.pep Sequence
Translation from 16 to 712
> BO23520.pep
MATRSCAYKDCEYYYVGHENALTKGRTLFAFPKQPQRARIWHENGQVHPK
IPHSQLFMCSLHFDRKFISSSKNRTLLVGEAVPFPYEESSSKPEEEPQQV
ASTSHESYYINLSDDELSINNVDTTSVTTIDAVHDSPPQKRPKESSIVIA
LKEAVKMEPNPNAGRVRAEPDNIDTTEVSVFNFKGQEYVQMSMEYYLQEK
RKMAKLLQDYKNALRSIKKHISHLDLASFLDH
BO23520.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:14:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dip2-PA | 226 | CG9771-PA | 1..226 | 1..226 | 1185 | 100 | Plus |