BO23521.complete Sequence
795 bp assembled on 2010-04-13
> BO23521.complete
GAAGTTATCAGTCGACATGTCCAAAATATTCACGCCCACAAATCAAATAC
GCCTCACAAATGTCGCCATTGTGAGGCTAAAAAAAGGTGGCAAGCGATTT
GAGATCGCCTGCTATAAAAATAAGGTTCTTTCGTGGAGGAGCAACAGCGA
AAAGGACATCGATGAGGTCCTGCAAACCCATACCGTGTTCACCAATGTCT
CCAAAGGACAGGCGGCCAAAAAGGACGAGCTGCAAAAGGCCTTCAATAAA
ACAGACGAGACTGAGATTTGCAAGGAGATCCTCAGCAAAGGAGAACTGCA
GGTGTCGGAAAAGGAGCGCCAAAGTTGTCTGGACACGCAACTAAATAGTA
TAGTTAATTCCGTGGCTGCGTTGTGTGTAAATCCAGAGACGCGTCGTCCA
TATCCCGCCTCCATCATCGAGAAATCCCTGAAGGATGCCCACTTCTCCGT
TAAGATGAACAGGAACACCAAGCAGAACACACTGGAGGCCATCAAGATTC
TCAAGGACCATATGCCCATCGAGAGGTCGCGCATGAAGCTGCGCGTTAGC
TTTGCTGGAAAGGAGGGCGGTGGCAAGCTCAAGGAATCGGTGGTCAAGTT
GGCCAACGCAGTGGAGCACGAGGAATGGGACGAGGCCACCTTGCACTTAA
CCTTGCTCATAGATCCTGGCCAATATCGTGTCATTGATGAGCTGGTAAGG
AACGAAACGAAGGGTAAGGGACTGCTGGAGCTGCTCGAGCTGAAGGAAGT
GGTGGAGAGCGAGGAACTCTTCGCAAGCTTTCTAGACCATTCGTG
BO23521.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:29:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8549-RB | 759 | CG8549-PB | 1..756 | 17..772 | 3780 | 100 | Plus |
CG8549-RA | 759 | CG8549-PA | 1..756 | 17..772 | 3780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:29:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8549-RB | 882 | CG8549-RB | 40..795 | 17..772 | 3780 | 100 | Plus |
CG8549-RA | 1037 | CG8549-RA | 195..950 | 17..772 | 3780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:29:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 6753316..6753942 | 146..772 | 3135 | 100 | Plus |
3L | 28110227 | 3L | 6753107..6753237 | 17..147 | 655 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:29:04 has no hits.
BO23521.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:02 Download gff for
BO23521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8549-RA | 195..955 | 17..779 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:12:11 Download gff for
BO23521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8549-RA | 195..955 | 17..779 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:23:02 Download gff for
BO23521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8549-RA | 195..955 | 17..779 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:23:02 Download gff for
BO23521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 6753107..6753237 | 17..147 | 100 | -> | Plus |
3L | 6753318..6753947 | 148..779 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:12:11 Download gff for
BO23521.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 6746207..6746337 | 17..147 | 100 | -> | Plus |
arm_3L | 6746418..6747047 | 148..779 | 99 | | Plus |
BO23521.pep Sequence
Translation from 16 to 793
> BO23521.pep
MSKIFTPTNQIRLTNVAIVRLKKGGKRFEIACYKNKVLSWRSNSEKDIDE
VLQTHTVFTNVSKGQAAKKDELQKAFNKTDETEICKEILSKGELQVSEKE
RQSCLDTQLNSIVNSVAALCVNPETRRPYPASIIEKSLKDAHFSVKMNRN
TKQNTLEAIKILKDHMPIERSRMKLRVSFAGKEGGGKLKESVVKLANAVE
HEEWDEATLHLTLLIDPGQYRVIDELVRNETKGKGLLELLELKEVVESEE
LFASFLDHS
BO23521.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:17:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8549-PB | 252 | CG8549-PB | 1..252 | 1..252 | 1271 | 100 | Plus |
CG8549-PA | 252 | CG8549-PA | 1..252 | 1..252 | 1271 | 100 | Plus |