BO23522.complete Sequence
781 bp assembled on 2010-04-13
GenBank Submission: KX795813
> BO23522.complete
GAAGTTATCAGTCGACATGGATCGTTGGCAGAATCGCGTGGCCGTTATCA
GTGGCGCCAGTTCCGGAATCGGAGCAGCCTGTGCCCGGCTTTTGGTGGCA
GCCGGTCTACAGGTGGTTGGCCTGGCCCGACGCACCGATCGCCTCGAGCA
GCTGCGCCAATCTTTGCCGGCGGAGCAGAGGATGCGCTTCCATCAGCACA
AATGCGATGTATCGCAGGAGTTGCAGGTGGACACGGCCTTCGAGTGGATT
GAAAAGGAACTGGGCGGCATCGATGTGCTGATCAATAATGCGGGCATTGT
GCTCGGTGGCCAGCTGATCGATATGCCCACCAAGGACATCAACAACATAC
TACAGACGAATCTCATGGGCAGCATTTACTGCACCAAATTGGCCGCCAGC
AGCATGAGACGCCGCCAGGTGGCTGGACATCTGATCTTTGTGAATAGCAC
GGCCGGAGTGGCCGGTTATAAGCCGGATCCGGCGGATGAGAGCCTCAACG
CGTACACGCCCAGCAAATTTGCCCTGACTGCCGTCCAGGAGATCTGCCGA
CAGGAGCTAATCAATCAAGGATCAAAAATTAAGACCACGAGCATCAATCC
CGGCTGGGTGGCCACCGAGATCGTTCCGGACGAAACGAAGGCCAAGCTGG
GCGAGGTAATCCTCCAGGCGGACGACGTCGCTCAGGCTGTACTGTACGCC
CTATCCACGCCACCGCACACTCAGGTGGAGCAGATAACGCTGAGGGCGGT
GGGGGAATACTTCGCAAGCTTTCTAGACCAT
BO23522.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:31:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10962-RB | 750 | CG10962-PB | 1..747 | 17..763 | 3585 | 98.7 | Plus |
| CG9360-RA | 756 | CG9360-PA | 1..66 | 17..82 | 210 | 87.9 | Plus |
| antdh-RA | 753 | CG1386-PA | 1..139 | 17..155 | 200 | 76.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:31:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10962-RB | 1074 | CG10962-RB | 29..775 | 17..763 | 3585 | 98.7 | Plus |
| CG9360-RA | 1035 | CG9360-RA | 110..175 | 17..82 | 210 | 87.9 | Plus |
| antdh-RA | 950 | CG1386-RA | 29..168 | 16..155 | 205 | 76.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:31:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8973655..8974227 | 589..17 | 2745 | 98.6 | Minus |
| X | 23542271 | X | 8973207..8973381 | 763..589 | 845 | 98.9 | Minus |
| X | 23542271 | X | 11764416..11764481 | 82..17 | 210 | 87.9 | Minus |
| X | 23542271 | X | 11168891..11169030 | 155..16 | 205 | 76.4 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:31:42 has no hits.
BO23522.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:02 Download gff for
BO23522.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10962-RB | 17..763 | 17..765 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:12:21 Download gff for
BO23522.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10962-RB | 29..775 | 17..765 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:24:12 Download gff for
BO23522.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10962-RB | 29..775 | 17..765 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:24:12 Download gff for
BO23522.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8973204..8973380 | 590..765 | 97 | <- | Minus |
| X | 8973655..8974227 | 17..589 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:12:21 Download gff for
BO23522.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8867237..8867413 | 590..765 | 97 | <- | Minus |
| arm_X | 8867688..8868260 | 17..589 | 98 | | Minus |
BO23522.pep Sequence
Translation from 16 to 781
> BO23522.pep
MDRWQNRVAVISGASSGIGAACARLLVAAGLQVVGLARRTDRLEQLRQSL
PAEQRMRFHQHKCDVSQELQVDTAFEWIEKELGGIDVLINNAGIVLGGQL
IDMPTKDINNILQTNLMGSIYCTKLAASSMRRRQVAGHLIFVNSTAGVAG
YKPDPADESLNAYTPSKFALTAVQEICRQELINQGSKIKTTSINPGWVAT
EIVPDETKAKLGEVILQADDVAQAVLYALSTPPHTQVEQITLRAVGEYFA
SFLDH
BO23522.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:14:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10962-PB | 249 | CG10962-PB | 1..249 | 1..249 | 1261 | 100 | Plus |
| CG40485-PB | 247 | CG40485-PB | 1..247 | 1..249 | 620 | 49.6 | Plus |
| antdh-PA | 250 | CG1386-PA | 1..248 | 1..247 | 618 | 49 | Plus |
| CG9360-PA | 251 | CG9360-PA | 1..249 | 1..247 | 581 | 50.4 | Plus |
| CG9150-PB | 251 | CG9150-PB | 1..251 | 1..249 | 577 | 47 | Plus |
