Clone BO23524 Report

Search the DGRC for BO23524

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:235
Well:24
Vector:pDNR-Dual
Associated Gene/TranscriptCG4447-RA
Protein status:BO23524.pep: Imported from assembly
Sequenced Size:796

Clone Sequence Records

BO23524.complete Sequence

796 bp assembled on 2010-04-15

GenBank Submission: KX799831

> BO23524.complete
GAAGTTATCAGTCGACATGCTGCGAAGTGCACTGCATTTAGCTGCCCTAG
GAGTGCGCCAGACGCGAGTGTCGAGCTCCTCACCGAAATTACCTCTAATC
CTGCAAAATAATCTAGAAAACACGAAATATCTACAAGTGGCGCGCGATTA
TGCAAAGGGCAAGGACAAAAAGAAGGAAAAAGGCGGCAAGGGAAAGCCGG
GCAAGGTGGAAATCAATGAGCAGCAGCTGCGCGAGATCCTCAATTTCGAT
GGCCTGAATAGCCAGATGCAGAAGTCCGTGATGCAGATGAAGGAGGATTT
TGTGAAGCACCTGTCGCTGCGATCCACCAGCGGTGCCATCGACACACTGC
GCATCAAAGTCGATGGCCAGGAGCACGAGCTGCAGGAACTGGCCCAAATC
TCTCGCAAGAATCCCAAGACCATCATAGTCAACATGATTGGCTTCCCGCA
AACGATTCCCGATGTCCTCAAAGCCATCGAAAAGAGTGGCATGAACCTTA
ATCCCCAACAGGATGGCACTACACTGTTCATACCCATCCCAAAGGTCACC
AAGGAGCACAGGGAAAATCTATCCAAGAATGCCAAAGCTCTGTTCGTCAA
ATATCGCGATGCCATACGAGGCGTTCAGAACGAACACATTCGCAAGCTGA
AAAAACAACCGGAACTTGGCAAGGATGATGCCTTCGCCGCACAGGCTCAG
GTCACTGCCATCGCGGATCGCTTCATCTCGGAGGCGGACAAGTTGCTGGC
CAGCAAGCAGAAGGAGCTGCTGGGCGATGCAAGCTTTCTAGACCAT

BO23524.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:29:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG4447-RA 765 CG4447-PA 1..762 17..778 3810 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:29:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG4447-RA 891 CG4447-RA 68..829 17..778 3810 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:29:55
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9364417..9365178 17..778 3810 100 Plus
Blast to na_te.dros performed on 2014-11-26 22:29:56 has no hits.

BO23524.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:30 Download gff for BO23524.complete
Subject Subject Range Query Range Percent Splice Strand
CG4447-RA 59..820 17..780 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:00:05 Download gff for BO23524.complete
Subject Subject Range Query Range Percent Splice Strand
CG4447-RA 68..829 17..780 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:02:49 Download gff for BO23524.complete
Subject Subject Range Query Range Percent Splice Strand
CG4447-RA 68..829 17..780 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:02:49 Download gff for BO23524.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9364417..9365178 17..780 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:00:05 Download gff for BO23524.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9357517..9358278 17..780 99   Plus

BO23524.pep Sequence

Translation from 16 to 796

> BO23524.pep
MLRSALHLAALGVRQTRVSSSSPKLPLILQNNLENTKYLQVARDYAKGKD
KKKEKGGKGKPGKVEINEQQLREILNFDGLNSQMQKSVMQMKEDFVKHLS
LRSTSGAIDTLRIKVDGQEHELQELAQISRKNPKTIIVNMIGFPQTIPDV
LKAIEKSGMNLNPQQDGTTLFIPIPKVTKEHRENLSKNAKALFVKYRDAI
RGVQNEHIRKLKKQPELGKDDAFAAQAQVTAIADRFISEADKLLASKQKE
LLGDASFLDH

BO23524.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:26:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG4447-PA 254 CG4447-PA 1..254 1..254 1268 100 Plus