BO23525.complete Sequence
952 bp assembled on 2010-04-13
GenBank Submission: KX796422
> BO23525.complete
GAAGTTATCAGTCGACATGTCGGAGGTCCGCATTCGCCCGCGCCAGGTCC
TCATCCTGATCATTGTCTTCCTCGTGGTGCTGATGATGGTGCACCGAAAC
GGGAAGCGCACATGCCAGGGTCCAGAATACCTCCAGGCCATGTTCGTCCA
AGGCGACACGTTACCCACGATTTACGCCGTAACGCCAACGTATCCACGGC
CCGCCCAGAAAGCCGAGCTAACCAGACTATCTCACCTCTTTATGCTGCTG
CCGCACCTGCACTGGATCATTGTGGAGGACACGAACGCCACCACTCCGCT
GGTCAGAAACCTTTTGGATAGAGCCGGATTGGAGAAGCGTTCCACGTTGC
TGAACATCAAGACGCCATCTGAGTTCAAGCTGAAGGGCAAGGACCCCAAC
TGGATTAAGCCACGCGGCGTGGAGCAAAGAAATCTGGCTTTGGCCTGGTT
GAGGAACCATGTCGACGTCGATCGGCACTCTATAGTGTTCTTCATGGACG
ACGACAACTCCTACTCCACGGAACTGTTCGCCGAGATGAGCAAAATCGAA
AGGGGTCGCGTGGGCGTCTGGCCGGTGGGTTTGGTCGGCGGTCTGATGGT
GGAGCGACCCCTGCTTACGGAGGATGGCACTAAGGTGACCGGATTCAATG
CCGCTTGGCGACCGGAAAGACCATTCCCCATCGACATGGCCGCCTTCGCC
ATCAGCATGGATCTCTTCATCAGGAATCCGCAGGCCACGTTCTCGTACGA
GGTGCAAAGAGGCTATCAGGAGAGCGAGATCCTGAGGCATCTGACCACCA
GGGATCAGCTGCAGCCACTGGCCAATAGGTGCACGGATGTGCTCGTCTGG
CACACGCGCACTGAGAAGACCAAGCTAGCCGCCGAGGAGGCGCTCCTGAA
GAAGGGCCAGCGATCCGATGGCGGCATGGAGGTCGCAAGCTTTCTAGACC
AT
BO23525.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:32:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GlcAT-I-RA | 921 | CG32775-PA | 1..918 | 17..934 | 4590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:32:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GlcAT-I-RA | 1560 | CG32775-RA | 76..993 | 17..934 | 4590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:32:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 4131555..4132266 | 223..934 | 3560 | 100 | Plus |
| X | 23542271 | X | 4131286..4131494 | 17..225 | 1045 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:32:17 has no hits.
BO23525.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:03 Download gff for
BO23525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-I-RA | 41..958 | 17..936 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:12:33 Download gff for
BO23525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-I-RA | 76..993 | 17..936 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:24:29 Download gff for
BO23525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GlcAT-I-RA | 76..993 | 17..936 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:24:29 Download gff for
BO23525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 4131286..4131494 | 17..225 | 100 | -> | Plus |
| X | 4131558..4132266 | 226..936 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:12:33 Download gff for
BO23525.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 4025319..4025527 | 17..225 | 100 | -> | Plus |
| arm_X | 4025591..4026299 | 226..936 | 99 | | Plus |
BO23525.pep Sequence
Translation from 16 to 952
> BO23525.pep
MSEVRIRPRQVLILIIVFLVVLMMVHRNGKRTCQGPEYLQAMFVQGDTLP
TIYAVTPTYPRPAQKAELTRLSHLFMLLPHLHWIIVEDTNATTPLVRNLL
DRAGLEKRSTLLNIKTPSEFKLKGKDPNWIKPRGVEQRNLALAWLRNHVD
VDRHSIVFFMDDDNSYSTELFAEMSKIERGRVGVWPVGLVGGLMVERPLL
TEDGTKVTGFNAAWRPERPFPIDMAAFAISMDLFIRNPQATFSYEVQRGY
QESEILRHLTTRDQLQPLANRCTDVLVWHTRTEKTKLAAEEALLKKGQRS
DGGMEVASFLDH
BO23525.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:17:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GlcAT-I-PA | 306 | CG32775-PA | 1..306 | 1..306 | 1595 | 100 | Plus |
| GlcAT-P-PD | 479 | CG6207-PD | 224..452 | 43..284 | 407 | 37.7 | Plus |
| GlcAT-P-PE | 316 | CG6207-PE | 68..289 | 50..284 | 402 | 38 | Plus |
| GlcAT-P-PB | 316 | CG6207-PB | 68..289 | 50..284 | 402 | 38 | Plus |
| GlcAT-P-PC | 316 | CG6207-PC | 68..289 | 50..284 | 402 | 38 | Plus |
