Clone BO23528 Report

Search the DGRC for BO23528

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:235
Well:28
Vector:pDNR-Dual
Associated Gene/TranscriptCG18731-RA
Protein status:BO23528.pep: Imported from assembly
Sequenced Size:391

Clone Sequence Records

BO23528.complete Sequence

391 bp assembled on 2010-04-13

GenBank Submission: KX794633

> BO23528.complete
GAAGTTATCAGTCGACATGTTTAGGAAGTCCAGGCCCAAAGTAGAGCCTC
CACCCACGGCTCCCAGTGTAGAGGAAATGCTGGCGGACATGGAAACGTTC
GAGGTCAATCAGCCTACGATAAGCGGATCTACAGACAACTTGGACTTGGA
GCACGCTTTCATGACTGAACCAGAGAATCTTCCCCTTTCAACATGGTGGC
AGATGTTCGACGAGTACGATCAGAAGGTGAAGAAACTGTCGGCCACCGTG
GGAGATCTGGAGACCCAACGAAATCAGTTAAAAGAATGCTATGCGAAGCT
GGAAAATAACGCGGATAAACTGAGAACGGACATCCAAAAGCAGCAGGCAC
TGGTCAAAGAAGCCCTTAAATGTGCAAGCTTTCTAGACCAT

BO23528.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:32:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG18731-RB 360 CG18731-PB 1..357 17..373 1785 100 Plus
CG18731-RA 360 CG18731-PA 1..357 17..373 1785 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:32:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG18731-RB 615 CG18731-RB 180..536 17..373 1785 100 Plus
CG18731-RA 600 CG18731-RA 165..521 17..373 1785 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:32:20
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 29725255..29725611 17..373 1785 100 Plus
Blast to na_te.dros performed on 2014-11-27 10:32:21 has no hits.

BO23528.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:05 Download gff for BO23528.complete
Subject Subject Range Query Range Percent Splice Strand
CG18731-RA 171..521 23..375 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:12:36 Download gff for BO23528.complete
Subject Subject Range Query Range Percent Splice Strand
CG18731-RA 171..521 23..375 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:24:31 Download gff for BO23528.complete
Subject Subject Range Query Range Percent Splice Strand
CG18731-RA 171..521 23..375 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:24:31 Download gff for BO23528.complete
Subject Subject Range Query Range Percent Splice Strand
3R 29725261..29725611 23..375 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:12:36 Download gff for BO23528.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 25550983..25551333 23..375 99   Plus

BO23528.pep Sequence

Translation from 16 to 391

> BO23528.pep
MFRKSRPKVEPPPTAPSVEEMLADMETFEVNQPTISGSTDNLDLEHAFMT
EPENLPLSTWWQMFDEYDQKVKKLSATVGDLETQRNQLKECYAKLENNAD
KLRTDIQKQQALVKEALKCASFLDH

BO23528.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:14:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG18731-PB 119 CG18731-PB 1..119 1..119 624 100 Plus
CG18731-PA 119 CG18731-PA 1..119 1..119 624 100 Plus