Clone BO23529 Report

Search the DGRC for BO23529

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:235
Well:29
Vector:pDNR-Dual
Associated Gene/TranscriptCG31950-RA
Protein status:BO23529.pep: Inserted from web
Sequenced Size:397

Clone Sequence Records

BO23529.complete Sequence

397 bp assembled on 2010-04-13

GenBank Submission: KX795104

> BO23529.complete
GAAGTTATCAGTCGACATGACAGAACTGAGCATCACTGGCCAACAGGTGA
TGCCTCCGCCCGCTTGTACACCCCCGGAGCCCTTCCGCATCACAACGAAC
GCCCCGCACCAGATGAACGATGCCAGTTTGACGCCGGGACGCAGGAAGCT
CCAGAAGTGGCTGGGTCGAGTTCTGCGGATCGTGATTACGGACGGACGCG
TGCTGGTGGGATTCTTCAACTGCACGGACCGCGACGCCAACATCGTGCTG
TCCATGTGCGCCGAGTACTTGGTGGAGGGCCAGGAGCCGCGCCTGCTGGG
CAACGTCATGGTTCCCGGCCAGCACATAGTCTCCCTAAGCATCGACGAGC
CGGATCCGCAGTCCAGCCTGCTGGTGCAAGCAAGCTTTCTAGACCAT

BO23529.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:50:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG31950-RB 366 CG31950-PB 1..363 17..379 1725 98.3 Plus
CG31950-RA 366 CG31950-PA 1..363 17..379 1725 98.3 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:50:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG31950-RB 658 CG31950-RB 249..612 16..379 1730 98.4 Plus
CG31950-RA 482 CG31950-RA 73..436 16..379 1730 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:50:19
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2878592..2878955 16..379 1730 98.4 Plus
Blast to na_te.dros performed on 2014-11-27 13:50:20 has no hits.

BO23529.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-09 16:56:50 Download gff for BO23529.complete
Subject Subject Range Query Range Percent Splice Strand
CG31950-RA 1..363 17..381 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:33:53 Download gff for BO23529.complete
Subject Subject Range Query Range Percent Splice Strand
CG31950-RA 74..436 17..381 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:27:40 Download gff for BO23529.complete
Subject Subject Range Query Range Percent Splice Strand
CG31950-RA 74..436 17..381 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:27:40 Download gff for BO23529.complete
Subject Subject Range Query Range Percent Splice Strand
2L 2878593..2878955 17..381 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:33:53 Download gff for BO23529.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2878593..2878955 17..381 97   Plus

BO23529.pep Sequence

Translation from 16 to 397

> BO23529.pep
MTELSITGQQVMPPPACTPPEPFRITTNAPHQMNDASLTPGRRKLQKWLG
RVLRIVITDGRVLVGFFNCTDRDANIVLSMCAEYLVEGQEPRLLGNVMVP
GQHIVSLSIDEPDPQSSLLVQASFLDH

BO23529.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:16:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG31950-PB 121 CG31950-PB 1..121 1..121 634 100 Plus
CG31950-PA 121 CG31950-PA 1..121 1..121 634 100 Plus