BO23531.complete Sequence
430 bp assembled on 2010-04-13
GenBank Submission: KX798862
> BO23531.complete
GAAGTTATCAGTCGACATGACCAGCCTAACCGCAGTTTTCCAGATGGCGA
GGCAGCGATTGATAGCCCCAGCGATAGGAAACTGGGCACGTTTTTATGCT
GCAAAACCGGCGGCGCCAGCGGGCAAGAAGAAAAAGCTTGGCAAGCTGGG
TCCCATCATGGAGAAGAAAGTCATACCCGTGGAAACGGATGCCAACAAAT
TGGTGAACTATGTATGCGGAAGTAACTACATGAAAACAGGAGAAGATATC
AAAATTAAACCGGATTCGGAATACCCCGACTGGCTGTGGACGCTGAATAC
GGAAGGCATCGTTCCGCTGGACGAACTGGACCCCAACTCCAAGCAGTACT
GGCGCCGTCTGAGGAAACTGGCCTTGCGGCGCAACAATCAGCTGTCCAAG
CTAAAGAAGTTCGCAAGCTTTCTAGACCAT
BO23531.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:32:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL54-RA | 399 | CG9353-PA | 1..396 | 17..412 | 1905 | 98.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:32:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL54-RA | 682 | CG9353-RA | 122..520 | 14..412 | 1920 | 98.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:32:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 21061270..21061425 | 257..412 | 735 | 98.1 | Plus |
2R | 25286936 | 2R | 21061070..21061206 | 117..253 | 670 | 99.3 | Plus |
2R | 25286936 | 2R | 21060910..21061015 | 14..119 | 530 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:32:51 has no hits.
BO23531.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:07 Download gff for
BO23531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL54-RA | 90..485 | 17..414 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:12:48 Download gff for
BO23531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL54-RA | 125..520 | 17..414 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:24:44 Download gff for
BO23531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL54-RA | 125..520 | 17..414 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:24:44 Download gff for
BO23531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 21060913..21061015 | 17..119 | 100 | -> | Plus |
2R | 21061073..21061206 | 120..253 | 99 | -> | Plus |
2R | 21061267..21061425 | 254..414 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:12:48 Download gff for
BO23531.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 16948418..16948520 | 17..119 | 100 | -> | Plus |
arm_2R | 16948578..16948711 | 120..253 | 99 | -> | Plus |
arm_2R | 16948772..16948930 | 254..414 | 96 | | Plus |
BO23531.pep Sequence
Translation from 16 to 430
> BO23531.pep
MTSLTAVFQMARQRLIAPAIGNWARFYAAKPAAPAGKKKKLGKLGPIMEK
KVIPVETDANKLVNYVCGSNYMKTGEDIKIKPDSEYPDWLWTLNTEGIVP
LDELDPNSKQYWRRLRKLALRRNNQLSKLKKFASFLDH
BO23531.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:17:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL54-PA | 132 | CG9353-PA | 1..132 | 1..132 | 696 | 100 | Plus |