BO23533.complete Sequence
694 bp assembled on 2010-04-13
GenBank Submission: KX796649
> BO23533.complete
GAAGTTATCAGTCGACATGTCAGATAAGATGAAAATGAGCCTTGACGACA
TTATCAAGATGAAATTTAATAAGAACAAGTTTGTTAATGCCAAAAATGAA
CGTGTTCAAGGAGGATCGATCAGAAAGCGAAATTCAGAAGGCGGACTTAG
AGGAATTCAAAGGTCCCGCAACGGAACTGGATTCATTCGGAAGAGCAAAT
TCAAACAGGAAACCCTTTTGAAGCCGCCAAAAAAACCGACTCTTGTCATG
GTTTGCAATTTGGATTACGGAGTGGATGATGACGACATCATGGAGCTTTT
CAATCAAGACGGCGTGGTGGAGAAAGGTTTTGTGCACTATGATCGCGATG
GTAACTCATTGGGCACCGCTCACTTGTCGTTCAAATATCGCGAAGAGGCC
TTCCAGATCATCGAGCAGTTCCACGGAGTCCGTTTGGATGGACGCCGATT
GAAATTACATCTCGTACAAAACACAAGAAATTTTAAACGCACTGATGTCG
ATGATCTTTCCTTGCGGATGGGTTCTTTCAAGACTCGTTTCTTGCAGAAT
GGTACTTTTAAGACTCGTTCCTTGCAGAATGGTTTTCAGAAGTCTCGTCT
TTTTCGCAATAGTTCCTTCAAGCCTCGTCCTTTCAAGAAACATAACTTTA
AGTCTCGAGCGTTCGATACTGATTTCGCAAGCTTTCTAGACCAT
BO23533.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:33:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ref2-RC | 663 | CG17031-PC | 1..660 | 17..676 | 3300 | 100 | Plus |
| Ref2-RB | 663 | CG17031-PB | 1..660 | 17..676 | 3300 | 100 | Plus |
| Ref2-RA | 663 | CG17031-PA | 1..660 | 17..676 | 3300 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:33:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ref2-RC | 1717 | CG17031-RC | 851..1512 | 15..676 | 3310 | 100 | Plus |
| Ref2-RB | 1511 | CG17031-RB | 645..1306 | 15..676 | 3310 | 100 | Plus |
| Ref2-RA | 911 | CG17031-RA | 45..706 | 15..676 | 3310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:33:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12610722..12611383 | 676..15 | 3310 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:33:15 has no hits.
BO23533.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:08 Download gff for
BO23533.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ref2-RA | 22..681 | 17..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:12:56 Download gff for
BO23533.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ref2-RA | 47..706 | 17..678 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:24:53 Download gff for
BO23533.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ref2-RA | 47..706 | 17..678 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:24:53 Download gff for
BO23533.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12610720..12611381 | 17..678 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:12:56 Download gff for
BO23533.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12610720..12611381 | 17..678 | 99 | | Minus |
BO23533.pep Sequence
Translation from 16 to 694
> BO23533.pep
MSDKMKMSLDDIIKMKFNKNKFVNAKNERVQGGSIRKRNSEGGLRGIQRS
RNGTGFIRKSKFKQETLLKPPKKPTLVMVCNLDYGVDDDDIMELFNQDGV
VEKGFVHYDRDGNSLGTAHLSFKYREEAFQIIEQFHGVRLDGRRLKLHLV
QNTRNFKRTDVDDLSLRMGSFKTRFLQNGTFKTRSLQNGFQKSRLFRNSS
FKPRPFKKHNFKSRAFDTDFASFLDH
BO23533.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:14:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ref2-PC | 220 | CG17031-PC | 1..220 | 1..220 | 1148 | 100 | Plus |
| Ref2-PB | 220 | CG17031-PB | 1..220 | 1..220 | 1148 | 100 | Plus |
| Ref2-PA | 220 | CG17031-PA | 1..220 | 1..220 | 1148 | 100 | Plus |
| Ref1-PA | 266 | CG1101-PA | 1..229 | 1..192 | 253 | 34.8 | Plus |
