BO23534.complete Sequence
1570 bp assembled on 2010-04-13
GenBank Submission: KX799215
> BO23534.complete
GAAGTTATCAGTCGACATGATCACTGCTCGTCTCCTGCTCTCGCTGATGA
TGCCAGTGCTGCTGGACGCAGCTGCTCCGCCACGACGGCCGAATGTGGTG
ATGGTGATCTTTGATGATCTGCGTCCAGTTATTGGAGCTTATGGCGATAC
GCTGGCCAGCACGCCGTATTTGGATAACTTTGCTAGAGGAAGTCACATCT
TTACAAGAGTTTACAGCCAGCAATCCCTGTGTGCACCCAGCCGGAATTCG
CTGCTCACGGGTCGAAGACCGGATACTCTGCATCTGTACGATTTCTACAG
TTACTGGCGCACTTTCACCGGAAATTTCACCACTTTGCCGCAGTACTTCA
AGGAGCACGGATATTACACCTATAGCTGTGGAAAGGTCTTCCATCCTGGC
CTCTCATCCAACAACACGGATGACTATCCCCTTAGTTGGTCGGCTCCAGC
ATTTCGTCCCCGAACCGAGCAGTTTATGAACTCGCCAGTGTGTCCCGATA
AGGAGGGCATTCTGCGGAAGAATCTCATCTGTCCAGTGGAGCTACAAACT
CAGCCGTACAAAACGCTGCCGGACATCGAGTCCGTGGCGGAGGCATTGCG
CTTTGTGGGCTCACGGAGCAGGCACAGCCAGGAACCATTTTTTCTGGCCA
TGGGCTTCCACAAGCCGCACATTAATTTCCGGTTCCCACGGCAATTCCTT
TCGAGATTCAACCTTTCCCAGTTTTACAATTACACGGAGGATAGCCTGAA
GCCGCCGGATATGCCGGCAGTGGCCTGGAATCCTTACACAGATGTGCGGG
CCAGGGATGACTTCAAGCACTCCAACATATCCTTTCCCTACGGACCGATA
TCCCCACTCCAGGCTGCTCAGATACGACAGAGCTACTACGCCTCGGTGTC
CTATGTGGATGATCTGTTTGGCAAGTTGATTGGGGGATTGGATCTGGATG
AGACGGTGGTGGTCGCTCTGGGGGATCATGGCTGGTCTCTGGGTGAGCAC
GCCGAGTGGGCCAAGTACAGCAACTTCGAGGTGGCGCTCAGGGTTCCACT
GATCATAAGAAGTCCACAGTTCCCTGTCGCCCAAACGAAGTACTATCACG
GGATCACAGAACTCCTTGATGTTTTCCCCACTTTGGTGGATCTGGCAGGA
TTACCCAAATTGGACAAATGCCAGAGCTCTCAGGAGTTGACCTGTGGCGA
GGGAAAAAGTCTTTACCATCAGCTGATGGGATTGGGAAGGGCGGATGAGC
ACGTGGCTCTCAGTCAGTACCCAAGACCAGGAATGCTGCCCACAAAGCAC
CCGAACAGCGACAAGCCGAAGTTAAGGAATATAAAAATCATGGGCTATAG
TCTCAGAACCGATATATATAGGTATACCATGTGGGTGAGGTTCCATGCGC
AAAACTTTAGCAGAGATTGGCACGATGTGTATGGCGAGGAGTTGTACGAC
CACCGCCTGGATTCGGGCGAGGAATTGAACCTGATGCCCCTGCCGCAGTT
CGATGATGTGCGTCAGCGCCTTCGCCGGCGATTGATGGAGATGGTGGGCA
GCGCAAGCTTTCTAGACCAT
BO23534.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:27:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12014-RA | 1539 | CG12014-PA | 1..1536 | 17..1552 | 7680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:27:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12014-RA | 1636 | CG12014-RA | 15..1553 | 14..1552 | 7695 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:27:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3378549..3379571 | 219..1241 | 5115 | 100 | Plus |
3L | 28110227 | 3L | 3378282..3378488 | 14..220 | 1035 | 100 | Plus |
3L | 28110227 | 3L | 3379622..3379796 | 1241..1415 | 875 | 100 | Plus |
3L | 28110227 | 3L | 3379862..3380000 | 1414..1552 | 695 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:27:43 has no hits.
BO23534.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:09 Download gff for
BO23534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12014-RA | 1..1536 | 17..1554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:54:29 Download gff for
BO23534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12014-RA | 18..1553 | 17..1554 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:26:00 Download gff for
BO23534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12014-RA | 18..1553 | 17..1554 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:26:00 Download gff for
BO23534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3379623..3379796 | 1242..1415 | 100 | -> | Plus |
3L | 3379864..3380000 | 1416..1554 | 98 | | Plus |
3L | 3378285..3378488 | 17..220 | 100 | -> | Plus |
3L | 3378551..3379571 | 221..1241 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:54:29 Download gff for
BO23534.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3378285..3378488 | 17..220 | 100 | -> | Plus |
arm_3L | 3378551..3379571 | 221..1241 | 100 | -> | Plus |
arm_3L | 3379623..3379796 | 1242..1415 | 100 | -> | Plus |
arm_3L | 3379864..3380000 | 1416..1554 | 98 | | Plus |
BO23534.pep Sequence
Translation from 16 to 1570
> BO23534.pep
MITARLLLSLMMPVLLDAAAPPRRPNVVMVIFDDLRPVIGAYGDTLASTP
YLDNFARGSHIFTRVYSQQSLCAPSRNSLLTGRRPDTLHLYDFYSYWRTF
TGNFTTLPQYFKEHGYYTYSCGKVFHPGLSSNNTDDYPLSWSAPAFRPRT
EQFMNSPVCPDKEGILRKNLICPVELQTQPYKTLPDIESVAEALRFVGSR
SRHSQEPFFLAMGFHKPHINFRFPRQFLSRFNLSQFYNYTEDSLKPPDMP
AVAWNPYTDVRARDDFKHSNISFPYGPISPLQAAQIRQSYYASVSYVDDL
FGKLIGGLDLDETVVVALGDHGWSLGEHAEWAKYSNFEVALRVPLIIRSP
QFPVAQTKYYHGITELLDVFPTLVDLAGLPKLDKCQSSQELTCGEGKSLY
HQLMGLGRADEHVALSQYPRPGMLPTKHPNSDKPKLRNIKIMGYSLRTDI
YRYTMWVRFHAQNFSRDWHDVYGEELYDHRLDSGEELNLMPLPQFDDVRQ
RLRRRLMEMVGSASFLDH
BO23534.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:12:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12014-PA | 512 | CG12014-PA | 1..512 | 1..512 | 2754 | 100 | Plus |
Sulf1-PC | 1114 | CG6725-PC | 48..386 | 19..380 | 179 | 24.6 | Plus |
Sulf1-PB | 1114 | CG6725-PB | 48..386 | 19..380 | 179 | 24.6 | Plus |
Sulf1-PA | 1114 | CG6725-PA | 48..386 | 19..380 | 179 | 24.6 | Plus |