BO23535.complete Sequence
1588 bp assembled on 2010-05-13
GenBank Submission: KX795678
> BO23535.complete
GAAGTTATCAGTCGACATGAATCATCTTAAGTGGATGGGCCACTCATCCA
CGATAATGGACATCCAGCGCTCGCTGCGTAATGATAATCAGCACTGCGAG
GTGGTGCTGGCCTCCAGGGACGGCGTTCGAGTGCGCGCCCATCTATTCGT
GCTAAGCACTTGCAGCGAACTGATGCGCAACCTCCTGGTGGACGTTCCGC
GCGGCCAGGAGGCAACCATAATGCTGCCCGACATCCGCGGAGATTTGCTG
GAGTGCATGCTGTCCTTCATTTACATGGGCGAGACTAGCCTGCCCTCCGC
GTCGCTCCCCGAGTTCCTGGAGGCCATTAACCTCCTCGGCATCAAATCTG
CCATCAGCTTTGAGTGCAATCCATCGGCTAGTCCACCCAGTGTCGATGTA
GAGAACCATTCGTTAGCCGTGGAGTCGGCCAAGTCCATTACAGGACTCCA
AATCGCTGAGGCCGAGCTGCTGGACGACGAGGAAGAGCCACATCCGATGG
TCTCCGTCCCAGCCACTACACTCGCGGGTTCTCAACACCAGCCCAGCCAT
TCCAGTCGGTCATTGGAGTACATTGATGTCTACGAGCCGCCGAAGATCAC
CTACTCCATCGAGCACATGGACGGAAGTTCCAGCGGCAACCAATTTATAC
TCACCGAGAACACGGGCACTTTCACCATAACGCAGTCAGCATCGAGTTTG
TCCAAAATTGAGGCAGATGAAACGGGTACCAGTGGCGCTGAAGTGGACCT
GGGCGATGATGACGTGGATGCGGACCTTGCTGAGGATTCTGAGGAGCACG
AATCACAAATGATCGACGAGGAGTTCGCGCAAGCCGATCCTCTTATGGAA
CTAGAAGCTGGTACTGAAATGGACGACGATGACGACGTGCACGACCAACT
TGTGGACGAGGAAATAGACGATAAGCCCCGCAAGTTGGGCGGGGGAAAGA
CGCGAATCCGTCGCCCCATAAGTGCGAAGGCTGTCAAACGATTGTCCGAT
TGCAAGCCAACGCGAATCCAGCAGTTCGCAGCTCTGAAACGTGAGGTAAA
AGACGATATCAACGATGCTTTGGATCTGGCGGCCGACGCGGTTATCATCG
AGGGCTTAAGCCTACAAAAGGCCGCCGACCGGTTTGATATCTCCAAGACA
GTCCTCTGGAGACGCGTGCGCACTAATCCCGCCTACATGCGAAACAATCG
GGAACGACCATCCCTGCAAGAGGCCTACGAGCGACTGAAGAATGGACATT
CTTTAAAGAGCATCAGCAGTGAGTTGCAAATCCCCATGTCCACGTTGCAC
AGACACAAGGTTCGTCTGTCCGCCCAGGGACGCCTGCCCAACTTCGTGTC
CTGCCGAAAGCGCGACAATACGCCCAAGGATGAGCTGCGCGACAAATTAG
CCAAGGCGGTGCATGCCTGCCTGAATGAGGGAATGTCCCAAAACCACGCG
GCCAACCTCTTCGAGATCCCCAAGAGCACGCTCTGGAGACACCTGCAGCG
ACGCACGACGAGCCAGAATAAAAAGGTCAAGAAGGAATTGAAGGCCAATT
ACGGAGACGATATGCTAAACGCAAGCTTTCTAGACCAT
BO23535.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:35:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pfk-RA | 1557 | CG15812-PA | 1..1554 | 17..1570 | 7770 | 100 | Plus |
| pfk-RB | 1539 | CG15812-PB | 1..1536 | 35..1570 | 7680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:35:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pfk-RA | 1958 | CG15812-RA | 107..1660 | 17..1570 | 7770 | 100 | Plus |
| pfk-RB | 1913 | CG15812-RB | 64..1615 | 19..1570 | 7760 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:35:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3160170..3161721 | 19..1570 | 7760 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:35:06 has no hits.
BO23535.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-13 16:18:04 Download gff for
BO23535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pfk-RA | 103..1656 | 17..1572 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:18:24 Download gff for
BO23535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pfk-RA | 107..1660 | 17..1572 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:13:24 Download gff for
BO23535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pfk-RA | 107..1660 | 17..1572 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:13:24 Download gff for
BO23535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3160169..3161721 | 17..1572 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:18:24 Download gff for
BO23535.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3160169..3161721 | 17..1572 | 99 | | Plus |
BO23535.pep Sequence
Translation from 16 to 1588
> BO23535.pep
MNHLKWMGHSSTIMDIQRSLRNDNQHCEVVLASRDGVRVRAHLFVLSTCS
ELMRNLLVDVPRGQEATIMLPDIRGDLLECMLSFIYMGETSLPSASLPEF
LEAINLLGIKSAISFECNPSASPPSVDVENHSLAVESAKSITGLQIAEAE
LLDDEEEPHPMVSVPATTLAGSQHQPSHSSRSLEYIDVYEPPKITYSIEH
MDGSSSGNQFILTENTGTFTITQSASSLSKIEADETGTSGAEVDLGDDDV
DADLAEDSEEHESQMIDEEFAQADPLMELEAGTEMDDDDDVHDQLVDEEI
DDKPRKLGGGKTRIRRPISAKAVKRLSDCKPTRIQQFAALKREVKDDIND
ALDLAADAVIIEGLSLQKAADRFDISKTVLWRRVRTNPAYMRNNRERPSL
QEAYERLKNGHSLKSISSELQIPMSTLHRHKVRLSAQGRLPNFVSCRKRD
NTPKDELRDKLAKAVHACLNEGMSQNHAANLFEIPKSTLWRHLQRRTTSQ
NKKVKKELKANYGDDMLNASFLDH
BO23535.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:33:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pfk-PA | 518 | CG15812-PA | 1..518 | 1..518 | 2649 | 100 | Plus |
| pfk-PB | 512 | CG15812-PB | 1..512 | 7..518 | 2610 | 100 | Plus |
