BO23538.complete Sequence
607 bp assembled on 2011-06-29
GenBank Submission: KX798547
> BO23538.complete
GAAGTTATCAGTCGACATGATCTCTAACTTTGATTGCACCGATAATCAGG
CCAGCAGCAAGGTGCTGAGGCCCCCGGGCGGCGGATCGAGCGACATCTTT
GGATCGGAGATGCCGCAGACCCCCAGGAACGTGAAGAATCGCATGGCGTC
CAACATATTCGCTGCCGAGAAAGATAATGGAGTGAAAAACAACGGTGATG
CACCACGTCGCGGCCAGAAGACCGTCGACTCCCACTCTCGGCTGTTTGGG
GAGCCCACCCGCCCGATCACCCCCGGCAAGAACCACATGAAGAGCAGCAT
TCCCTTTGGTCAGAACACAGAGGCCGTTGCCGCCCAGAAGCTGCTGACCA
CCAATGGCCACTACAACGGCAAGAGCGGATCGGTGTCCTCGGCCTCGTCT
TCGGTGTCGTCCTCCACCGAGAACCTCAAGATGAACAGTGGCTCGAGATC
AGAGGGCAACCCCGTCACAGGCGAGGGCTACAAGGTCGTAGCCAACGAGT
ATTCCCAGCGCCAGGAGTCGTCCAATGGCGGCACTCCGGTGATCAACAAG
AACCGCATTCCCCCAGGCGGCTACTCGTCGGGCCTGTGGGCAAGCTTTCT
AGACCAT
BO23538.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:36:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jupiter-RD | 576 | CG31363-PD | 1..573 | 17..589 | 2865 | 100 | Plus |
| Jupiter-RA | 594 | CG31363-PA | 1..591 | 17..589 | 2650 | 97 | Plus |
| Jupiter-RC | 594 | CG31363-PC | 63..591 | 61..589 | 2645 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:36:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jupiter-RD | 1517 | CG31363-RD | 160..732 | 17..589 | 2865 | 100 | Plus |
| Jupiter-RA | 1535 | CG31363-RA | 160..750 | 17..589 | 2650 | 97 | Plus |
| Jupiter-RC | 1581 | CG31363-RC | 268..796 | 61..589 | 2645 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:36:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11592367..11592625 | 452..194 | 1295 | 100 | Minus |
| 3R | 32079331 | 3R | 11591171..11591310 | 589..450 | 700 | 100 | Minus |
| 3R | 32079331 | 3R | 11593631..11593770 | 196..57 | 685 | 99.3 | Minus |
| 3R | 32079331 | 3R | 11619703..11619747 | 61..17 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:36:13 has no hits.
BO23538.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:09 Download gff for
BO23538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jupiter-RD | 188..763 | 17..593 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-29 12:27:18 Download gff for
BO23538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jupiter-RD | 188..760 | 17..591 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:05:00 Download gff for
BO23538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jupiter-RD | 160..732 | 17..591 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:23:00 Download gff for
BO23538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Jupiter-RD | 160..732 | 17..591 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:23:00 Download gff for
BO23538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11592367..11592624 | 195..452 | 100 | <- | Minus |
| 3R | 11591169..11591307 | 453..591 | 98 | <- | Minus |
| 3R | 11593633..11593766 | 61..194 | 100 | <- | Minus |
| 3R | 11619704..11619747 | 17..60 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:05:00 Download gff for
BO23538.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7418089..7418346 | 195..452 | 100 | <- | Minus |
| arm_3R | 7419355..7419488 | 61..194 | 100 | <- | Minus |
| arm_3R | 7445426..7445469 | 17..60 | 100 | | Minus |
| arm_3R | 7416891..7417029 | 453..591 | 98 | <- | Minus |
BO23538.pep Sequence
Translation from 16 to 607
> BO23538.pep
MISNFDCTDNQASSKVLRPPGGGSSDIFGSEMPQTPRNVKNRMASNIFAA
EKDNGVKNNGDAPRRGQKTVDSHSRLFGEPTRPITPGKNHMKSSIPFGQN
TEAVAAQKLLTTNGHYNGKSGSVSSASSSVSSSTENLKMNSGSRSEGNPV
TGEGYKVVANEYSQRQESSNGGTPVINKNRIPPGGYSSGLWASFLDH
BO23538.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:53:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Jupiter-PD | 191 | CG31363-PD | 1..191 | 1..191 | 997 | 100 | Plus |
| Jupiter-PA | 197 | CG31363-PA | 1..197 | 1..191 | 976 | 96.4 | Plus |
| Jupiter-PH | 202 | CG31363-PH | 1..202 | 1..191 | 975 | 94.6 | Plus |
| Jupiter-PC | 197 | CG31363-PC | 17..197 | 11..191 | 925 | 97.8 | Plus |
| Jupiter-PE | 208 | CG31363-PE | 17..208 | 11..191 | 903 | 92.2 | Plus |
