Clone BO23567 Report

Search the DGRC for BO23567

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:235
Well:67
Vector:pDNR-Dual
Associated Gene/TranscriptCG7857-RA
Protein status:BO23567.pep: Imported from assembly
Sequenced Size:970

Clone Sequence Records

BO23567.complete Sequence

970 bp assembled on 2010-04-14

GenBank Submission: KX796848

> BO23567.complete
GAAGTTATCAGTCGACATGTGTGACGGCGATGTGGCAATTGCGGAGCTGG
AATCCCGTCTGGATGAGGTCAGTCTGGAGGACATAGGTGCCAGACATCGT
CGCGAGCGCAAGGATTTGCAGGCCAAGCTGCAGGCCATGAAGAAGAATGC
GCCGAAAAATAATAAAAACAAGCGGAAGGAGTTCCTGGAGGAGATGGCTC
GCCTGGAGGGAGAGCTGGAGCAGCGCCACAAGGCGGAACTGAAGGCAGCG
GAAGCCATGGAGGCACCGGTGTTGGTGGAACCGGTCGTCAAAGAGCCAGC
GGAAAAGCCAGAAACTGAAGTGACAGACGATGATGGAATCGAGGAAAAAG
AGGAACAGCTGGCGCCCAATCAGCGTGTTTCCAAGGCACAGAAACGCCGG
GACAAGAAGGCAAAGGAGGCACGTGCACGAGAGGCAGAGATCAAGACGGA
GCTGCAAAATGCTGCCAATCAGCCAACGCCCAAGTTAATCGAACTGCAGC
AGATTACAGCAAAGCTATCCCAACGCCAATTATCCCTTCACAATATACCC
TCCGATGGCGACTGCTTATATCAGTCCATCAGACACCAACTTATCGTAAA
TGCTCTTCCAGGTCACAGTGTTCAGGAGTTGCGGGAGGAAACTGCCAATT
ATGTGCGTGCTCACAAGGACTCGCTTATCTCATACATGATCCACCCGGAA
ACAGGAGACATTCTGAACGACCAACAATTCGAACAATACTGCCACGACAT
AGCAAAAACTCACGCTTGGGGTGGCCACATAGAACTGAAGGCCATCTCAT
CGCTACTCCGGGTGCCCATTGAAGTTATCCAAGCGGAAGGAGCACCGACG
CTCCTGGGGCAAGAGGAATTCGGTGGATCACCGCTGATCATCTGCTACCA
CCGCCACATATACCAATTGGGTGCCCACTACAATTCCACGGTGCCAGCAG
CCGCAAGCTTTCTAGACCAT

BO23567.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:23:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG7857-RA 939 CG7857-PA 1..936 17..952 4680 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:23:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG7857-RA 1234 CG7857-RA 80..1017 15..952 4690 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:22:58
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15504217..15504815 613..15 2995 100 Minus
3L 28110227 3L 15503817..15504159 952..610 1715 100 Minus
Blast to na_te.dros performed on 2014-11-27 01:22:59 has no hits.

BO23567.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:10 Download gff for BO23567.complete
Subject Subject Range Query Range Percent Splice Strand
CG7857-RA 82..1017 17..954 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:52:31 Download gff for BO23567.complete
Subject Subject Range Query Range Percent Splice Strand
CG7857-RA 82..1017 17..954 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:24:21 Download gff for BO23567.complete
Subject Subject Range Query Range Percent Splice Strand
CG7857-RA 82..1017 17..954 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:24:21 Download gff for BO23567.complete
Subject Subject Range Query Range Percent Splice Strand
3L 15503815..15504157 612..954 99 <- Minus
3L 15504219..15504813 17..611 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:52:31 Download gff for BO23567.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15496915..15497257 612..954 99 <- Minus
arm_3L 15497319..15497913 17..611 100   Minus

BO23567.pep Sequence

Translation from 16 to 970

> BO23567.pep
MCDGDVAIAELESRLDEVSLEDIGARHRRERKDLQAKLQAMKKNAPKNNK
NKRKEFLEEMARLEGELEQRHKAELKAAEAMEAPVLVEPVVKEPAEKPET
EVTDDDGIEEKEEQLAPNQRVSKAQKRRDKKAKEARAREAEIKTELQNAA
NQPTPKLIELQQITAKLSQRQLSLHNIPSDGDCLYQSIRHQLIVNALPGH
SVQELREETANYVRAHKDSLISYMIHPETGDILNDQQFEQYCHDIAKTHA
WGGHIELKAISSLLRVPIEVIQAEGAPTLLGQEEFGGSPLIICYHRHIYQ
LGAHYNSTVPAAASFLDH

BO23567.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:36:56
Subject Length Description Subject Range Query Range Score Percent Strand
CG7857-PA 312 CG7857-PA 1..312 1..312 1598 100 Plus