BO23567.complete Sequence
970 bp assembled on 2010-04-14
GenBank Submission: KX796848
> BO23567.complete
GAAGTTATCAGTCGACATGTGTGACGGCGATGTGGCAATTGCGGAGCTGG
AATCCCGTCTGGATGAGGTCAGTCTGGAGGACATAGGTGCCAGACATCGT
CGCGAGCGCAAGGATTTGCAGGCCAAGCTGCAGGCCATGAAGAAGAATGC
GCCGAAAAATAATAAAAACAAGCGGAAGGAGTTCCTGGAGGAGATGGCTC
GCCTGGAGGGAGAGCTGGAGCAGCGCCACAAGGCGGAACTGAAGGCAGCG
GAAGCCATGGAGGCACCGGTGTTGGTGGAACCGGTCGTCAAAGAGCCAGC
GGAAAAGCCAGAAACTGAAGTGACAGACGATGATGGAATCGAGGAAAAAG
AGGAACAGCTGGCGCCCAATCAGCGTGTTTCCAAGGCACAGAAACGCCGG
GACAAGAAGGCAAAGGAGGCACGTGCACGAGAGGCAGAGATCAAGACGGA
GCTGCAAAATGCTGCCAATCAGCCAACGCCCAAGTTAATCGAACTGCAGC
AGATTACAGCAAAGCTATCCCAACGCCAATTATCCCTTCACAATATACCC
TCCGATGGCGACTGCTTATATCAGTCCATCAGACACCAACTTATCGTAAA
TGCTCTTCCAGGTCACAGTGTTCAGGAGTTGCGGGAGGAAACTGCCAATT
ATGTGCGTGCTCACAAGGACTCGCTTATCTCATACATGATCCACCCGGAA
ACAGGAGACATTCTGAACGACCAACAATTCGAACAATACTGCCACGACAT
AGCAAAAACTCACGCTTGGGGTGGCCACATAGAACTGAAGGCCATCTCAT
CGCTACTCCGGGTGCCCATTGAAGTTATCCAAGCGGAAGGAGCACCGACG
CTCCTGGGGCAAGAGGAATTCGGTGGATCACCGCTGATCATCTGCTACCA
CCGCCACATATACCAATTGGGTGCCCACTACAATTCCACGGTGCCAGCAG
CCGCAAGCTTTCTAGACCAT
BO23567.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:23:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7857-RA | 939 | CG7857-PA | 1..936 | 17..952 | 4680 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:23:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7857-RA | 1234 | CG7857-RA | 80..1017 | 15..952 | 4690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:22:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15504217..15504815 | 613..15 | 2995 | 100 | Minus |
3L | 28110227 | 3L | 15503817..15504159 | 952..610 | 1715 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:22:59 has no hits.
BO23567.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:10 Download gff for
BO23567.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7857-RA | 82..1017 | 17..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:52:31 Download gff for
BO23567.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7857-RA | 82..1017 | 17..954 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:24:21 Download gff for
BO23567.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7857-RA | 82..1017 | 17..954 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:24:21 Download gff for
BO23567.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15503815..15504157 | 612..954 | 99 | <- | Minus |
3L | 15504219..15504813 | 17..611 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:52:31 Download gff for
BO23567.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15496915..15497257 | 612..954 | 99 | <- | Minus |
arm_3L | 15497319..15497913 | 17..611 | 100 | | Minus |
BO23567.pep Sequence
Translation from 16 to 970
> BO23567.pep
MCDGDVAIAELESRLDEVSLEDIGARHRRERKDLQAKLQAMKKNAPKNNK
NKRKEFLEEMARLEGELEQRHKAELKAAEAMEAPVLVEPVVKEPAEKPET
EVTDDDGIEEKEEQLAPNQRVSKAQKRRDKKAKEARAREAEIKTELQNAA
NQPTPKLIELQQITAKLSQRQLSLHNIPSDGDCLYQSIRHQLIVNALPGH
SVQELREETANYVRAHKDSLISYMIHPETGDILNDQQFEQYCHDIAKTHA
WGGHIELKAISSLLRVPIEVIQAEGAPTLLGQEEFGGSPLIICYHRHIYQ
LGAHYNSTVPAAASFLDH
BO23567.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:36:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7857-PA | 312 | CG7857-PA | 1..312 | 1..312 | 1598 | 100 | Plus |