BO23574.complete Sequence
682 bp assembled on 2010-04-13
GenBank Submission: KX798106
> BO23574.complete
GAAGTTATCAGTCGACATGGAGAGCCTGTACCACCAAACCAACAATGTGG
TAAAGGACATCGAGCGCGATTTCCAGCGACTGAGTCAGCTCAGTGCCCAG
GAATCGCTTGACGTGGAAAACGGCATTCAATTGAAGATTACCCAGGCGAA
CGCCAACTGCGATCGGTTGGATGTGCTGCTGTATAAGGTGCCACCTTCGC
AGCGACAAAGCTCCAAACTTCGTGTGGATCAGCTGAAATATGACCTGAGA
CACCTGCAGACATCACTGCAGACGGCGCGGGAACGAAGACAGCGACGAAT
GCAGGAGATCTCCGAGAGGGAACAGCTGCTGAATCACAGATTCACGGCAA
ACAGCGCGCAGCCGGAGGAAACGCGCCTGCAATTGGACTACGAACTGCAG
CATCATACGCAGCTGGGTAACGCCCATCGGGGTGTGGATGACATGATTGC
CTCGGGCAGCGGCATTCTCGAGAGCCTGATCTCGCAGAGAATGACGCTGG
GCGGAGCGCACAAGAGAATCCAGGCGATAGGCAGCACACTGGGTCTGTCC
AATCACACGATGAAACTTATTGAACGCCGGCTGGTCGAAGATCGTCGGAT
ATTCATCGGAGGAGTGGTGGTCACCTTGCTTATCATCGCCCTGATCATCT
ATTTCCTAGTGCTCGCAAGCTTTCTAGACCAT
BO23574.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:22:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Membrin-RA | 651 | CG4780-PA | 1..648 | 17..664 | 3150 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:22:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Membrin-RA | 858 | CG4780-RA | 141..792 | 13..664 | 3170 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:22:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 5366806..5367315 | 155..664 | 2490 | 99.2 | Plus |
3L | 28110227 | 3L | 5366595..5366735 | 13..153 | 690 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:22:15 has no hits.
BO23574.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:47 Download gff for
BO23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG4780-RA | 115..762 | 17..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:07:59 Download gff for
BO23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
membrin-RA | 145..792 | 17..666 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:20:02 Download gff for
BO23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Membrin-RA | 145..792 | 17..666 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:20:02 Download gff for
BO23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 5366599..5366735 | 17..153 | 99 | -> | Plus |
3L | 5366805..5367315 | 154..666 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:07:59 Download gff for
BO23574.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 5359699..5359835 | 17..153 | 99 | -> | Plus |
arm_3L | 5359905..5360415 | 154..666 | 98 | | Plus |
BO23574.pep Sequence
Translation from 16 to 682
> BO23574.pep
MESLYHQTNNVVKDIERDFQRLSQLSAQESLDVENGIQLKITQANANCDR
LDVLLYKVPPSQRQSSKLRVDQLKYDLRHLQTSLQTARERRQRRMQEISE
REQLLNHRFTANSAQPEETRLQLDYELQHHTQLGNAHRGVDDMIASGSGI
LESLISQRMTLGGAHKRIQAIGSTLGLSNHTMKLIERRLVEDRRIFIGGV
VVTLLIIALIIYFLVLASFLDH
BO23574.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:18:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Membrin-PA | 216 | CG4780-PA | 1..216 | 1..216 | 1073 | 100 | Plus |