BO23575.complete Sequence
586 bp assembled on 2010-04-13
GenBank Submission: KX796432
> BO23575.complete
GAAGTTATCAGTCGACATGTACCAGCTGGAGAAGATCTGGGTCCTGCTGT
GCCTGGCCCTCGTCGGTGTCCTTGGCTTCGGCCAGTTCCACATGAAGCAC
TATCAGCTGCAGCGTAACTACAATACGCAGGAGGATTCCGGCGAGAATGA
CAATAGTGTGCTGCGAACCTTTCGCCGCTGCATGTGGGAGCAGTCGAAGT
TTCTGCCCCGCCGCCTCGTCCTTTTGAGCCTGTGCTCGAATCTCTTCTGC
GAGAACAATCACATAATGCCCCGTTCCAGGTCTATTTTCGTAGTGGAAAA
AATGTCTAGGCCGAATGACTGCCTGGACATCCTGCCCGAGCAATGCGAGC
AGGGCGATGAGGAGGAGCTGATGTACAAGCCCTTCCCCGACTGCTGTCCG
GTTTATTGCAACCTGAAGCGTCGGATGCAGCGCCTGCGCACCATGCACTT
CCGGCACCGCCTGCTGCGCAACAAACAGGACGGCTCAGCGGGATCCGCTG
GCGGTGGATCCGCTGGTGGCGACGGTCCCAATAACTCGCTCCTCAGTGAG
TTTGTCTACAACAACTACGCAAGCTTTCTAGACCAT
BO23575.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:21:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1552-RC | 555 | CG1552-PC | 1..552 | 17..568 | 2760 | 100 | Plus |
| CG1552-RA | 555 | CG1552-PA | 1..552 | 17..568 | 2760 | 100 | Plus |
| CG1552-RB | 516 | CG1552-PB | 1..263 | 17..279 | 1315 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:21:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1552-RC | 1060 | CG1552-RC | 68..623 | 13..568 | 2765 | 99.8 | Plus |
| CG1552-RA | 837 | CG1552-RA | 28..583 | 13..568 | 2765 | 99.8 | Plus |
| CG1552-RB | 798 | CG1552-RB | 28..294 | 13..279 | 1320 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:21:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11052608..11052857 | 568..319 | 1250 | 100 | Minus |
| X | 23542271 | X | 11053034..11053187 | 318..165 | 770 | 100 | Minus |
| X | 23542271 | X | 11053337..11053489 | 165..13 | 750 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:21:30 has no hits.
BO23575.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:40 Download gff for
BO23575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1552-RA | 32..583 | 17..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:07:43 Download gff for
BO23575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1552-RA | 32..583 | 17..570 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:19:42 Download gff for
BO23575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1552-RA | 32..583 | 17..570 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:19:42 Download gff for
BO23575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11052606..11052857 | 319..570 | 99 | <- | Minus |
| X | 11053034..11053187 | 165..318 | 100 | <- | Minus |
| X | 11053338..11053485 | 17..164 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:07:43 Download gff for
BO23575.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10947371..10947518 | 17..164 | 100 | | Minus |
| arm_X | 10946639..10946890 | 319..570 | 99 | <- | Minus |
| arm_X | 10947067..10947220 | 165..318 | 100 | <- | Minus |
BO23575.pep Sequence
Translation from 16 to 586
> BO23575.pep
MYQLEKIWVLLCLALVGVLGFGQFHMKHYQLQRNYNTQEDSGENDNSVLR
TFRRCMWEQSKFLPRRLVLLSLCSNLFCENNHIMPRSRSIFVVEKMSRPN
DCLDILPEQCEQGDEEELMYKPFPDCCPVYCNLKRRMQRLRTMHFRHRLL
RNKQDGSAGSAGGGSAGGDGPNNSLLSEFVYNNYASFLDH
BO23575.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:13:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1552-PC | 184 | CG1552-PC | 1..184 | 1..184 | 1004 | 100 | Plus |
| CG1552-PA | 184 | CG1552-PA | 1..184 | 1..184 | 1004 | 100 | Plus |
| CG1552-PB | 171 | CG1552-PB | 1..171 | 1..184 | 910 | 92.4 | Plus |
