BO23580.complete Sequence
619 bp assembled on 2011-06-29
GenBank Submission: KX796270
> BO23580.complete
GAAGTTATCAGTCGACATGGAACCCTTCTTCGCGAGCTGTGACCAGAAAG
TGAGAGATGGTGGCTGGATGGTGATCGCCTATAGATTCGATGGCAGCGAG
GACTTCAACAAGGATTGGCAGAACTATAAGGCCGGTTTTGGCGCTTTAAA
CTCGGAGTTCTTTATCGGATTGGATAAGCTGCACAGGTTGACCAACAGTG
AGCACCACGAGTTGCTCATCATAATGAAGAAGAAAAGTGGAGAGGAACGT
TTCGCGCTGTACGATCACTTCAGTATTGGCAGTGAATCGGAAAAGTATCT
TCTATATGTACTTGGTGCCTACAAAGGTGATGCTGGTGATTCGCTACGTT
ACCATGCGGGCAAGAAGTTCACCACATTCGATCAGGATAACGACGATAAT
GGCCAAAACTGCGCCAGGACGCATGCAGGTGCCTGGTGGTATGGAAGGGA
GTGCTTCGAGAGCAACTTGTTTGGTACATTCCAGTCGAAGTACGGACAGG
AGATTGGCTATTTCAAGGGCATCCTGTGGAAATCCTTCCTGCCAGGACCC
ACTGGCTCGCTTAGCTATGTCCGCATGCTCATCCGGCCGCTCAAGAAACA
GGCAAGCTTTCTAGACCAT
BO23580.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:35:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1791-RC | 1002 | CG1791-PC | 415..999 | 17..601 | 2925 | 100 | Plus |
CG1791-RB | 588 | CG1791-PB | 1..585 | 17..601 | 2925 | 100 | Plus |
CG1791-RA | 1005 | CG1791-PA | 418..1002 | 17..601 | 2925 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:35:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1791-RC | 1176 | CG1791-RC | 519..1103 | 17..601 | 2925 | 100 | Plus |
CG1791-RB | 1193 | CG1791-RB | 536..1120 | 17..601 | 2925 | 100 | Plus |
CG1791-RA | 1179 | CG1791-RA | 522..1106 | 17..601 | 2925 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:35:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 9963725..9964170 | 462..17 | 2230 | 100 | Minus |
X | 23542271 | X | 9963526..9963666 | 601..461 | 705 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:35:02 has no hits.
BO23580.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:44 Download gff for
BO23580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1791-RB | 536..1120 | 17..601 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-29 12:27:17 Download gff for
BO23580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1791-RB | 536..1120 | 17..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:04:35 Download gff for
BO23580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1791-RA | 522..1106 | 17..603 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:22:33 Download gff for
BO23580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1791-RA | 522..1106 | 17..603 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:22:33 Download gff for
BO23580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 9963524..9963664 | 463..603 | 98 | <- | Minus |
X | 9963725..9964170 | 17..462 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:04:35 Download gff for
BO23580.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 9857557..9857697 | 463..603 | 98 | <- | Minus |
arm_X | 9857758..9858203 | 17..462 | 100 | | Minus |
BO23580.pep Sequence
Translation from 16 to 619
> BO23580.pep
MEPFFASCDQKVRDGGWMVIAYRFDGSEDFNKDWQNYKAGFGALNSEFFI
GLDKLHRLTNSEHHELLIIMKKKSGEERFALYDHFSIGSESEKYLLYVLG
AYKGDAGDSLRYHAGKKFTTFDQDNDDNGQNCARTHAGAWWYGRECFESN
LFGTFQSKYGQEIGYFKGILWKSFLPGPTGSLSYVRMLIRPLKKQASFLD
H
BO23580.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:54:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1791-PB | 195 | CG1791-PB | 1..195 | 1..195 | 1069 | 100 | Plus |
CG1791-PC | 333 | CG1791-PC | 139..333 | 1..195 | 1069 | 100 | Plus |
CG1791-PA | 334 | CG1791-PA | 140..334 | 1..195 | 1069 | 100 | Plus |
CG1889-PC | 332 | CG1889-PC | 138..328 | 1..191 | 631 | 58.6 | Plus |
CG1889-PA | 332 | CG1889-PA | 138..328 | 1..191 | 631 | 58.6 | Plus |