BO23587.complete Sequence
949 bp assembled on 2011-06-29
GenBank Submission: KX798844
> BO23587.complete
GAAGTTATCAGTCGACATGAGCTTTAATTTAAGTCTGCGGCCCCCCATCC
GCCTCCTGGTGGACCTGGTCCTGCTGGGCCTACTTATTGTCCTGGTGGAG
AACTTCCGTCGCTTGTGGGGGCCTCCGACGAAGCGTGGTTTCTTCTGTGA
TGACGAGTCCTTAATGTATCCCTACCACGAAAACACAGTGAGCCCCACGC
TGCTCCACTGGCTGGGACTGTACCTTCCACTGATCAGTCTGGTCGTCCTT
GAAAGCTTTCTCAGCCACCGGAAGGACATGGCCCCCTGGCCAACACTATG
GCCGGTGTACAACACTGTGCGCTGGTTCCTTTACGGCTACGTATCCAACG
ACCTGCTCAAGGGAATCGGAAAGCAGGCACTTGGGCGACTGAGGCCCCAC
TTCTTTGCCGTGTGCAGTCCACATTTCCCGGACGGCTCCAGCTGCTTAGA
TGAGTCGCATCGAGGTGCTCTGAAATACCACACAGACTACGAGTGTCGGC
CAAATCTTTCGCAAGCCACCGAGGAAATGATTCGTGACGTAAACGTGTCC
TTTCCCAGCGGCCATTCCGCCATGGCTTTCTACGGCTTGGTGTTTGTGGC
GCTGCACCTGCGCCGCCGCCGCTGGCCTCTCCGTGGATCCTTGCTTAGTC
CTGTGCTGCAGCTAGCTTGCGTGGCTCTGGCCTGGTTCGTGGCCATCAGC
CGGGTCATCGACTACAAACACCACTGGTCGGATGTTGCGGCCGGTTCGCT
GTTGGGTGCCGGGAGCGCCCTTGCGGTTACTCGGGCTGCCGCGTCCGAGG
AGCTACAATGGAGGTGCCAGGATTCACTGGCGAGTGCGAAGCAGGAGGCT
GCAGTGGTCGATGTGGCCGACGTCAAAGGGGGCCAACAGATGCCGCATGA
TTTGTCTCTAGTTACGTGCCACATCTCTAATGCAAGCTTTCTAGACCAT
BO23587.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:36:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11425-RA | 918 | CG11425-PA | 1..915 | 17..931 | 4575 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:36:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11425-RA | 998 | CG11425-RA | 39..953 | 17..931 | 4575 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:36:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22474833..22475747 | 17..931 | 4575 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:36:33 has no hits.
BO23587.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:27 Download gff for
BO23587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11425-RA | 39..956 | 17..932 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-06-29 12:27:19 Download gff for
BO23587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11425-RA | 39..953 | 17..933 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:05:09 Download gff for
BO23587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11425-RA | 39..953 | 17..933 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:23:06 Download gff for
BO23587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11425-RA | 39..953 | 17..933 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:23:06 Download gff for
BO23587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22474833..22475747 | 17..933 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:05:09 Download gff for
BO23587.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22467933..22468847 | 17..933 | 99 | | Plus |
BO23587.pep Sequence
Translation from 16 to 949
> BO23587.pep
MSFNLSLRPPIRLLVDLVLLGLLIVLVENFRRLWGPPTKRGFFCDDESLM
YPYHENTVSPTLLHWLGLYLPLISLVVLESFLSHRKDMAPWPTLWPVYNT
VRWFLYGYVSNDLLKGIGKQALGRLRPHFFAVCSPHFPDGSSCLDESHRG
ALKYHTDYECRPNLSQATEEMIRDVNVSFPSGHSAMAFYGLVFVALHLRR
RRWPLRGSLLSPVLQLACVALAWFVAISRVIDYKHHWSDVAAGSLLGAGS
ALAVTRAAASEELQWRCQDSLASAKQEAAVVDVADVKGGQQMPHDLSLVT
CHISNASFLDH
BO23587.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:54:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11425-PA | 305 | CG11425-PA | 1..305 | 1..305 | 1624 | 100 | Plus |
| wun-PC | 364 | CG8804-PC | 92..343 | 20..255 | 454 | 38.8 | Plus |
| wun-PA | 300 | CG8804-PA | 13..263 | 20..254 | 453 | 38.9 | Plus |
| wun-PB | 379 | CG8804-PB | 92..342 | 20..254 | 453 | 38.9 | Plus |
| CG11426-PA | 340 | CG11426-PA | 37..282 | 12..252 | 440 | 40.6 | Plus |
