BO23639.complete Sequence
523 bp assembled on 2010-04-13
GenBank Submission: KX798566
> BO23639.complete
GAAGTTATCAGTCGACATGTCGGACGGCATCGAGGTCGAGCAATTGGTGG
AGAGCAAGCCGAGAAGGATGCCGCTGGCCACGTCGCTGGAGAAGGACTCG
ATTCGCGAGGCCTACGAGGATGTACGCTCCGATCTGACAGACACCGAGTG
GGCGGTATTCAAGTTCGATGGCGCCCAGATTATTGTACATGCGCGCGGTC
AGTGCTTTGAGGAATTCCGACAGCAGTTCGGCGACTCGGAGCGCGCCTTT
GGCTACATACGCATCCAGATGGGTGACGAGATGTCCAAGCGCAAAAAGTT
CATCTTCCTGACGTGGATCGGGCAGGAGGTGGGCGTCATCCAGAGGGCCA
AGATGTCCACGGACAAGGCGCTGATCAAGGATGTCCTCAACAATTTTGCC
GTGGAACTTCAGGCGGGAGTGGAGGCCGAGCTGGACATTGAGCTCTTCCG
TGAAGCACTGAACCGTGCCGGCGGCGCCAACTACGGAACGGGCATCCGGG
ATAACGCAAGCTTTCTAGACCAT
BO23639.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:33:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6891-RA | 492 | CG6891-PA | 1..489 | 17..505 | 2445 | 100 | Plus |
CG6891-RC | 441 | CG6891-PC | 1..438 | 68..505 | 2190 | 100 | Plus |
CG6891-RB | 441 | CG6891-PB | 1..438 | 68..505 | 2190 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:33:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6891-RA | 994 | CG6891-RA | 351..840 | 16..505 | 2450 | 100 | Plus |
CG6891-RB | 805 | CG6891-RB | 210..651 | 64..505 | 2210 | 100 | Plus |
CG6891-RC | 950 | CG6891-RC | 359..796 | 68..505 | 2190 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:33:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18780680..18781004 | 67..391 | 1625 | 100 | Plus |
X | 23542271 | X | 18785786..18785927 | 250..391 | 650 | 97.2 | Plus |
X | 23542271 | X | 18781078..18781191 | 392..505 | 570 | 100 | Plus |
X | 23542271 | X | 18786001..18786073 | 392..464 | 365 | 100 | Plus |
X | 23542271 | X | 18775578..18775629 | 16..67 | 260 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:33:47 has no hits.
BO23639.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:10 Download gff for
BO23639.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6891-RA | 350..838 | 17..507 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:13:06 Download gff for
BO23639.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6891-RA | 352..840 | 17..507 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:25:05 Download gff for
BO23639.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6891-RA | 352..840 | 17..507 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:25:05 Download gff for
BO23639.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18780681..18781004 | 68..391 | 100 | -> | Plus |
X | 18781078..18781191 | 392..507 | 98 | | Plus |
X | 18775579..18775629 | 17..67 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:13:06 Download gff for
BO23639.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18669612..18669662 | 17..67 | 100 | -> | Plus |
arm_X | 18674714..18675037 | 68..391 | 100 | -> | Plus |
arm_X | 18675111..18675224 | 392..507 | 98 | | Plus |
BO23639.pep Sequence
Translation from 16 to 523
> BO23639.pep
MSDGIEVEQLVESKPRRMPLATSLEKDSIREAYEDVRSDLTDTEWAVFKF
DGAQIIVHARGQCFEEFRQQFGDSERAFGYIRIQMGDEMSKRKKFIFLTW
IGQEVGVIQRAKMSTDKALIKDVLNNFAVELQAGVEAELDIELFREALNR
AGGANYGTGIRDNASFLDH
BO23639.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:13:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6891-PA | 163 | CG6891-PA | 1..163 | 1..163 | 829 | 100 | Plus |
CG6891-PC | 146 | CG6891-PC | 1..146 | 18..163 | 746 | 100 | Plus |
CG6891-PB | 146 | CG6891-PB | 1..146 | 18..163 | 746 | 100 | Plus |