Clone BO23644 Report

Search the DGRC for BO23644

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:236
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG11475-RA
Protein status:BO23644.pep: Imported from assembly
Sequenced Size:1426

Clone Sequence Records

BO23644.complete Sequence

1426 bp assembled on 2010-05-06

GenBank Submission: KX795491

> BO23644.complete
GAAGTTATCAGTCGACATGCATAGTGCTGACTTAACTAGCCACACCGATG
TGACGGAAACCACCAATCTTGCCGCCATTGAGCAGTTGAAGGAACAGCGA
TTCAACGAGAAGAATCTGATCATATACAATCCGCCTGGAGAGAATGACGA
ACTTTCCGCCAGATTCCTGCGCAGCCTAGCTTTTGCCACCTTCAAGCGAA
GATCGCCCGCATTTTTGAGGGATTTGATCACATTCCTACAGGATCGTGAG
GCGGATATAATTGAACAGTGCGGGGACTATGCCCATTTCGATTTGAAGCG
CACCATCTGGAGCCTGGAGCTGCTGCGCGATGATATAATCAACAACAGGG
AGTTCCAGATAATTCGCGTCAAGTCGCCGGACACTGACAGCTGGAACTCG
TTCCTCAAGGGTCTTGGAGAGGACAGAAGGCAGTGGTTTTCGGCAATTTG
GCTGCATGCGGATTGCTACATGTACCGCCGCATTTGGTCGATCTTCCAGC
GATCCGAAACCCTGAAAAATTATGATTACTTCGGTGATCAAAAGACGTCC
ATTGTTACCAATGTGGCGCCACTGATGAGGGACATCCTAGTCTCAACCAA
AGGCATTAAGCGCAGCCAGGAGGACTTTCAGTATCTCCTAAAACTATCTA
CGTGGTCCAATCACGGTGACCTAAACATCACAAGAAGGGGTGCGCATGAC
AAAATCTATAAACAGATTGCCAAATACGACATTGATTTGCTGGCGGATCA
GTCGTTCGATGTTTGGCAGGATCTCATCGAGGCCAGTGCGCCCGTCTACG
TGGACATCGTGTGCGACAATGCGGGATTTGAGCTCTTTGCGGATCTGCTG
CTGGGCGAGTACATCATAGAATCGGGCTTGGCCAGTCGGGTGCGGTTCCA
TGTGAAGGCTATACCGTGGTTCATCTCGGATTGCACGCACAAGGACTTTA
ACTGGCTAGTAAAGTTTCTACGCAAGCACGAGTTCCAGGAATTGAATGCC
TTTGGTAAGCGGATACGTGGCTATATCAGGGATCGTTCCTTTATCCTGTG
CGACAAAAGCTACTTCTGGACAAGTGGTCACGACTACAGCCAGATGAAGC
GGGTGCAACCTTGCCTGTATGTCTACATTAGCCAGGCATCCCTGGTGATC
TTTAAAGGAGATCTCAACTACCGGAAACTGCTCGGCGACATCAACAACAA
ACCCACTACCCAGTTTTCCGACTGCCTGCGCGGCTTTCAACCATCCAGCG
TCTGTGCCCTGCGCGTCATTAAGTCCGATATCTATTGTGGACTGCCCATC
TGCACGGTGGAGAAGCTAAGCGAGGAGAATCCCGAGTGGATGGTCACTGG
CGACAAGGCCGTCGTACAGGTGGCCATCAAGCATCGACTCTCGAGTGACA
TTATCGTTGCAAGCTTTCTAGACCAT

BO23644.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:36:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG11475-RA 1395 CG11475-PA 1..1392 17..1408 6960 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11475-RA 1562 CG11475-RA 104..1499 13..1408 6965 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:01
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22069788..22071183 1408..13 6965 99.9 Minus
Blast to na_te.dros performed on 2014-11-28 02:36:02 has no hits.

BO23644.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-06 09:24:19 Download gff for BO23644.complete
Subject Subject Range Query Range Percent Splice Strand
CG11475-RA 108..1499 17..1410 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:09 Download gff for BO23644.complete
Subject Subject Range Query Range Percent Splice Strand
CG11475-RA 108..1499 17..1410 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:25 Download gff for BO23644.complete
Subject Subject Range Query Range Percent Splice Strand
CG11475-RA 108..1499 17..1410 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:25 Download gff for BO23644.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22069785..22071179 17..1410 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:09 Download gff for BO23644.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 17957290..17958684 17..1410 99   Minus

BO23644.pep Sequence

Translation from 16 to 1426

> BO23644.pep
MHSADLTSHTDVTETTNLAAIEQLKEQRFNEKNLIIYNPPGENDELSARF
LRSLAFATFKRRSPAFLRDLITFLQDREADIIEQCGDYAHFDLKRTIWSL
ELLRDDIINNREFQIIRVKSPDTDSWNSFLKGLGEDRRQWFSAIWLHADC
YMYRRIWSIFQRSETLKNYDYFGDQKTSIVTNVAPLMRDILVSTKGIKRS
QEDFQYLLKLSTWSNHGDLNITRRGAHDKIYKQIAKYDIDLLADQSFDVW
QDLIEASAPVYVDIVCDNAGFELFADLLLGEYIIESGLASRVRFHVKAIP
WFISDCTHKDFNWLVKFLRKHEFQELNAFGKRIRGYIRDRSFILCDKSYF
WTSGHDYSQMKRVQPCLYVYISQASLVIFKGDLNYRKLLGDINNKPTTQF
SDCLRGFQPSSVCALRVIKSDIYCGLPICTVEKLSEENPEWMVTGDKAVV
QVAIKHRLSSDIIVASFLDH

BO23644.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:13:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG11475-PA 464 CG11475-PA 1..464 1..464 2454 100 Plus
CG11474-PC 436 CG11474-PC 4..436 26..455 837 40.3 Plus
CG11474-PA 436 CG11474-PA 4..436 26..455 837 40.3 Plus
CG4161-PB 484 CG4161-PB 21..443 39..451 754 35.9 Plus
CG4161-PA 484 CG4161-PA 21..443 39..451 754 35.9 Plus