BO23649.complete Sequence
868 bp assembled on 2010-04-13
GenBank Submission: KX799248
> BO23649.complete
GAAGTTATCAGTCGACATGCTGGGCAATCTGTGCCGGCTTGTGGGTGCCC
GTTCCCCGATCACCAGGCGCTTGCTGCACACGGAGCGGAAAGTTCGGGTG
AATGGCTCAGATTTGAACATTGTGGAGAGCGGCAGTGGGGAGCGGAGTCT
ACTCCTGATGCCGGGAGCACTGGGTTCCTCGTGGACCGACTTTAGGCCCC
AGATCGAGCAGCTGCCGAAACTGCTGCCGGGTCACACCATCATCGCCTGG
GATCCGCCGGGTTATGGCAAATCAGTGCCGCCGCAGCGCAAGTTCGGCCT
TGAATTCTTTCGGGAGGATGCCCAGGCAGCCGTGGATTTGATGCGTGCCC
TGGACAGACCACGCTTCTCCATTTTGGGCTGGAGCGATGGAGGCATCACG
GCGCTTATAGTCGCAGGTCGCCATGCGGAAGCTGTGGATCGCCTAGCAAT
CTGGGGAGCAGGTGCCTACTTGAACGCCGACGAAGTCAAGGCCCTTAAGA
ACATTCGGGATGTAGCCAAGTGGTCGCCGCGCATGCGTGAGCCCATGGAA
AAGGTTTACGGCGTCGAAAGATTCCCCCAATTGTGGGCCGAATGGGTGGA
CGCCGCATGCGCCTTCTATGACCAACGGGATGGAGACTTCTGTCGCACCG
AAGTTGAGAAAATAAAGATACCTACTTTTATACTCCACGGAAAGAAGGAT
CCCATGATAGCAGCGGAGCACATTCCTTGGCTGAGGGAGCGTTTGCCTCA
TGCGGAATATTATGAGTTCCCCGAGGGGAAGCATAATATCCATTTACGTT
ATGCGGAGGAGTTTAACAAACTGGTGGCCGATTTCTTTAACAAAAATAAC
GCAAGCTTTCTAGACCAT
BO23649.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:27:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5377-RA | 837 | CG5377-PA | 1..834 | 17..850 | 4080 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:27:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5377-RA | 1253 | CG5377-RA | 176..1009 | 17..850 | 4080 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:27:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22467149..22467982 | 850..17 | 4080 | 99.3 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:27:52 has no hits.
BO23649.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:27:14 Download gff for
BO23649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5377-RA | 146..967 | 17..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:11 Download gff for
BO23649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5377-RA | 176..997 | 17..838 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:36 Download gff for
BO23649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5377-RA | 176..997 | 17..838 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:36 Download gff for
BO23649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22467161..22467982 | 17..838 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:11 Download gff for
BO23649.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18292883..18293704 | 17..838 | 99 | | Minus |
BO23649.pep Sequence
Translation from 16 to 868
> BO23649.pep
MLGNLCRLVGARSPITRRLLHTERKVRVNGSDLNIVESGSGERSLLLMPG
ALGSSWTDFRPQIEQLPKLLPGHTIIAWDPPGYGKSVPPQRKFGLEFFRE
DAQAAVDLMRALDRPRFSILGWSDGGITALIVAGRHAEAVDRLAIWGAGA
YLNADEVKALKNIRDVAKWSPRMREPMEKVYGVERFPQLWAEWVDAACAF
YDQRDGDFCRTEVEKIKIPTFILHGKKDPMIAAEHIPWLRERLPHAEYYE
FPEGKHNIHLRYAEEFNKLVADFFNKNNASFLDH
BO23649.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:13:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5377-PA | 278 | CG5377-PA | 1..278 | 1..278 | 1489 | 100 | Plus |