BO23658.complete Sequence
1276 bp assembled on 2010-05-06
GenBank Submission: KX798078
> BO23658.complete
GAAGTTATCAGTCGACATGATGAACAGCCTAAAGAAATTGCCCGTGCGCA
TGCTGGCTAACGCTGCACGTCAGCAAAGTGCTGCGATGTCCTCGGCAACT
GGTCTCCCCCCACCCCTCACCTTTCTCACCGACGATGAGAAAATGATGAA
GGAGACTGTTGCCAAACTGGCTCAGGAGCAGATCCAGCCCTTGGTGAAGA
AAATGGACTTTGAGCACAAATTCGATCCCTCCGTGGTGAAGGCGGTTTTC
GAGAACGGCCTGATGGGCATTGAGATCGACACCGAGCTGGGAGGCAGTGG
CTGCAACTTCATGACCAACATCGTCGTGGTGGAGGAGCTGTCCAAAATCG
ATCCTGCCGTCGCCGCTTTTGTGGACATTCACAACACACTGGTCAACTCG
CTGATGATCAAGTTCGGCAATGCCGAGCAGAAGGCGAAGTATCTGCCTAA
GCTGGCCCAGGAGTACGCCGGTAGCTTCGCCCTGACCGAACCCGGTGCAG
GATCCGATGCCTTCTCCCTGAAGACCGTCGCCAAGAAGGACGGCTCCCAC
TACGTAATCAACGGCTCCAAGATGTGGATCTCCAACTCTGATGTGGCGGG
AGTCTTCCTGATCTTTGCCAATGCCAAGCCAGAGGATGGCTACCGTGGCA
TTACCACCTTCATTGTGGACCGTGAGACTCCCGGTCTGATCGTGAACAAG
CCGGAGGACAAGCTGGGCATCCGTGCCTCTGGAACCTGCCAGCTCACCTT
CGACAACGTGCGTGTGCCCGAGGAGAACATCCTGGGAACCTTCGGCCATG
GCTACAAGTATGCCGCCGGCTTCCTGAACGAGGGTCGCATCGGTATTGCT
GCCCAGATGGTGGGCCTGGCCCAAGGAACCTTCGACGCGACCATTCCGTA
CCTGCTGGAGCGCAAGCAGTTCGGTGATGCCATCTATAACTTCCAGTCGA
TGCAGCATCAGATCGCCACCGTGGCCACGGAGATCGAGGCCGCCCGCCTG
ATGACCTACAATGCTGCACGTCTGCAGGAGCAGGGTGTGCCCTTCCAGAA
GGAGGCGGCCATGGCCAAGTACTACGCCTCCGAGGTGGCCCAGAGGGCGG
CGATCAAGTGCGTCGACTGGATGGGAGGCGTTGGCTTCACCCGTGATTTC
CCGCAGGAGAAGTACTACCGTGACGTGAAGATCGGAGCCATTTACGAGGG
CACCACCAACATGCAGCTGAGCACCATTGCCAAGTGCATCAAGAAGGATT
ATGCGGCCGCAAGCTTTCTAGACCAT
BO23658.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:36:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3902-RA | 1245 | CG3902-PA | 1..1242 | 17..1258 | 6210 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:36:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3902-RA | 1585 | CG3902-RA | 119..1360 | 17..1258 | 6210 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:36:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18893345..18893965 | 1258..638 | 3105 | 100 | Minus |
| 3L | 28110227 | 3L | 18894355..18894835 | 638..158 | 2405 | 100 | Minus |
| 3L | 28110227 | 3L | 18897944..18898050 | 158..52 | 535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:36:13 has no hits.
BO23658.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-05-06 09:24:20 Download gff for
BO23658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3902-RA | 116..1357 | 17..1260 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:23:13 Download gff for
BO23658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3902-RA | 119..1360 | 17..1260 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:32:28 Download gff for
BO23658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3902-RA | 119..1360 | 17..1260 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:32:28 Download gff for
BO23658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18893343..18893965 | 638..1260 | 99 | <- | Minus |
| 3L | 18894356..18894834 | 159..637 | 100 | <- | Minus |
| 3L | 18897944..18898049 | 53..158 | 100 | <- | Minus |
| 3L | 18898140..18898175 | 17..52 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:23:13 Download gff for
BO23658.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 18891044..18891149 | 53..158 | 100 | <- | Minus |
| arm_3L | 18891240..18891275 | 17..52 | 100 | | Minus |
| arm_3L | 18886443..18887065 | 638..1260 | 99 | <- | Minus |
| arm_3L | 18887456..18887934 | 159..637 | 100 | <- | Minus |
BO23658.pep Sequence
Translation from 16 to 1276
> BO23658.pep
MMNSLKKLPVRMLANAARQQSAAMSSATGLPPPLTFLTDDEKMMKETVAK
LAQEQIQPLVKKMDFEHKFDPSVVKAVFENGLMGIEIDTELGGSGCNFMT
NIVVVEELSKIDPAVAAFVDIHNTLVNSLMIKFGNAEQKAKYLPKLAQEY
AGSFALTEPGAGSDAFSLKTVAKKDGSHYVINGSKMWISNSDVAGVFLIF
ANAKPEDGYRGITTFIVDRETPGLIVNKPEDKLGIRASGTCQLTFDNVRV
PEENILGTFGHGYKYAAGFLNEGRIGIAAQMVGLAQGTFDATIPYLLERK
QFGDAIYNFQSMQHQIATVATEIEAARLMTYNAARLQEQGVPFQKEAAMA
KYYASEVAQRAAIKCVDWMGGVGFTRDFPQEKYYRDVKIGAIYEGTTNMQ
LSTIAKCIKKDYAAASFLDH
BO23658.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:10:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3902-PA | 414 | CG3902-PA | 1..414 | 1..414 | 2118 | 100 | Plus |
| Arc42-PA | 405 | CG4703-PA | 24..405 | 34..414 | 736 | 39 | Plus |
| CG4860-PA | 415 | CG4860-PA | 34..411 | 34..411 | 698 | 37.5 | Plus |
| CG12262-PA | 419 | CG12262-PA | 6..409 | 11..406 | 595 | 36.5 | Plus |
| CG6638-PA | 420 | CG6638-PA | 39..419 | 37..412 | 548 | 33.3 | Plus |
