BO23668.complete Sequence
934 bp assembled on 2010-04-14
GenBank Submission: KX793846
> BO23668.complete
GAAGTTATCAGTCGACATGTCTGATAAAACCGTCGAGTTGATGAATCCCC
ATTTGGAAACAGCACGATCGGATTATTTATACCACCTGGACATCAATGTG
GCCAATACCCGAGACACCAGTGAGTTACAGAATAGGTTCGGCGATGTTAG
GGTCATCTGCATGGGTGGAACGGGCTCCAGAATGCGGCAGTTAGCCCTTT
ACCTAAGAGATATTCTGGTAGTGTCGGAGTCCGGCGATCCGGTGGATTTG
TGCGAGCGTGGCAACCGATATGCCATGTACAAGGTGGGTCCGGTACTGTG
CGTGAGCCACGGCGTTGGATCCTCCTCCTTCAGTGTCGTGCTGCACGAGC
TGATCAAGCTCCTCAAATATGCGCGGTGCCAGGACCCCGTCCTGCTTCGG
ATTGGCACCTGCGGAGGACTTGGCGTCCCTCCCGGCACAGTGGTGGCCAG
CAAAAATGCCTTCAATGGTCTGCTGCGCAACGAGCATGAAATCGCTATTC
TCGGACAGCGAGTGGTGCGTCCGGCTCAGTTTTCCGAGGACGTGATCAGG
GATTTACTTGCATTCGGTGTCGACGCCAACGACGGATTTCAGACCATAAG
TGCCAACACAATGGGAACAGATTGCTTTTACGAAGGTCAAGGTCGCACCG
ATGGAGCCATATGCGAGTACTCGGAGAAGGATAAGATGGAGTTCTTGCAG
AAGTGCCACGATCTGGGAATCCGGAACATCGAGATGGAGGCCAGCATGTT
CGCCTCCGTCACCCAAAAAGTGGGGGTCAAAGCAGGCGATGTATGCGTGA
CCCTGATCGATCGCCTAAAGGGAGATCAGATTACTATTACTATTGACCAG
AAGCACGAATTCGAGCAGCGTCCCTTTTTCGTCGTGGGTCGCTACATTAA
GAGGTTACTGCAGCAGGCAAGCTTTCTAGACCAT
BO23668.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:15:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17224-RD | 903 | CG17224-PD | 1..900 | 17..916 | 4455 | 99.7 | Plus |
| CG17224-RC | 903 | CG17224-PC | 1..900 | 17..916 | 4455 | 99.7 | Plus |
| CG17224-RB | 903 | CG17224-PB | 1..900 | 17..916 | 4455 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:15:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17224-RD | 1118 | CG17224-RD | 125..1024 | 17..916 | 4455 | 99.7 | Plus |
| CG17224-RC | 1438 | CG17224-RC | 201..1100 | 17..916 | 4455 | 99.7 | Plus |
| CG17224-RB | 1251 | CG17224-RB | 258..1157 | 17..916 | 4455 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:15:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3017383..3017726 | 494..151 | 1675 | 99.1 | Minus |
| 2L | 23513712 | 2L | 3016926..3017121 | 829..634 | 980 | 100 | Minus |
| 2L | 23513712 | 2L | 3017177..3017320 | 637..494 | 720 | 100 | Minus |
| 2L | 23513712 | 2L | 3017778..3017903 | 153..28 | 630 | 100 | Minus |
| 2L | 23513712 | 2L | 3016779..3016869 | 916..826 | 455 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:15:10 has no hits.
BO23668.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:12 Download gff for
BO23668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17224-RB | 239..1138 | 17..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:49:09 Download gff for
BO23668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17224-RB | 258..1157 | 17..918 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:21:47 Download gff for
BO23668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17224-RB | 258..1157 | 17..918 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:21:47 Download gff for
BO23668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3016776..3016865 | 830..918 | 97 | <- | Minus |
| 2L | 3016926..3017119 | 636..829 | 100 | <- | Minus |
| 2L | 3017179..3017320 | 494..635 | 100 | <- | Minus |
| 2L | 3017384..3017725 | 152..493 | 99 | <- | Minus |
| 2L | 3017780..3017903 | 28..151 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:49:09 Download gff for
BO23668.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3016776..3016865 | 830..918 | 97 | <- | Minus |
| arm_2L | 3016926..3017119 | 636..829 | 100 | <- | Minus |
| arm_2L | 3017179..3017320 | 494..635 | 100 | <- | Minus |
| arm_2L | 3017384..3017725 | 152..493 | 99 | <- | Minus |
| arm_2L | 3017780..3017903 | 28..151 | 100 | | Minus |
BO23668.pep Sequence
Translation from 16 to 934
> BO23668.pep
MSDKTVELMNPHLETARSDYLYHLDINVANTRDTSELQNRFGDVRVICMG
GTGSRMRQLALYLRDILVVSESGDPVDLCERGNRYAMYKVGPVLCVSHGV
GSSSFSVVLHELIKLLKYARCQDPVLLRIGTCGGLGVPPGTVVASKNAFN
GLLRNEHEIAILGQRVVRPAQFSEDVIRDLLAFGVDANDGFQTISANTMG
TDCFYEGQGRTDGAICEYSEKDKMEFLQKCHDLGIRNIEMEASMFASVTQ
KVGVKAGDVCVTLIDRLKGDQITITIDQKHEFEQRPFFVVGRYIKRLLQQ
ASFLDH
BO23668.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:36:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17224-PD | 300 | CG17224-PD | 1..300 | 1..300 | 1555 | 100 | Plus |
| CG17224-PC | 300 | CG17224-PC | 1..300 | 1..300 | 1555 | 100 | Plus |
| CG17224-PB | 300 | CG17224-PB | 1..300 | 1..300 | 1555 | 100 | Plus |
| CG17224-PA | 300 | CG17224-PA | 1..300 | 1..300 | 1555 | 100 | Plus |
| CG6330-PB | 347 | CG6330-PB | 21..314 | 2..298 | 693 | 45.2 | Plus |
