BO23670.complete Sequence
1075 bp assembled on 2010-04-13
GenBank Submission: KX798359
> BO23670.complete
GAAGTTATCAGTCGACATGGAGATTGACTTGGGATTTGCGGAAAAGAGCG
ACAATGGCGCCTGGCTGAGCAACCGCTACTTTCCCAGCAAGCTGGGTGGC
CAGCCCGCATGGCTGGAACTGGAGGCCTTGCCGCCCACGTCGCAGCTGCA
GTGCAGCAAGTGCAGGGCACCCAAATCCTTCCTGGCTCAGCTATACGCTC
CCTTCGAAGACGAGTACAACTTTCATCGGTCCATCTATGTGTTCCTGTGC
CGGAATTCCGACTGCCAGGAGGCCCAAAATGCAAGCAATTTCACAGTCCT
CAGGTCACAGTTGCCGCGAAAGAATAAGTTCTTTTCGGAGGAGGAGCCGA
GCGACGTGGGTCAACCCCTGCCCGCCGTTCCCTGCCTAAAGAAACTATGC
GCCGCCTGCGGTTGCCATGCTCCCCACGCCTGCAGCAAATGCAAGGCTAT
CCACTACTGCTCACCAGAGCATCAAAGGGCCCACTGGCCACAACACAAGC
CAAACTGCGGAGCACCAGAAGTAGCCACTGAGAAGCCCTTAACACAAATC
GTTTTCCCAGAATTTGAGATTGTAATGGACAGCAACCCCGTGGAGTCTGG
CGAGGAGGACAAGGACGATGAGGCTCGCTTGGCGGAGTTCCAGGAGCTGG
AGTCCAGCGGGAAGACGGGCGACTTGAGCAATGTTTCCGAGGCGGAAATG
GACAAGTACTTCGGAAACTCGGCGGCCGCCGATGACAAGACCTTTCGTCA
GTTCAAAAAGCAAACAGCAGCCGAACCCGATCAGATCGTGCGCTACAAAC
GTGGAGGCCAGCCCCTCTGGATCACGAATACCGTCAAAACGGTGGAGGAC
CAACTTAACAAGCTGCCCAATTGCATTGCTTGCGGAGGAGAGCGTCAGTT
CGAATTTCAGATTATGCCGCAAGCGCTGACTCTTCTGGAGGACGAAAACC
TCGACTGGGGCGTCCTGGCCGTGTACACCTGCGCCAAAAGCTGCCCCATC
GACGGCTACGTGGAGGAGCTTCTCATCAAGCAGGACATTGTGGCGGAGGA
TCAGAGTGCAAGCTTTCTAGACCAT
BO23670.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:20:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zfrp8-RB | 1044 | CG3260-PB | 1..1041 | 17..1057 | 5100 | 99.3 | Plus |
| Zfrp8-RA | 1044 | CG3260-PA | 1..1041 | 17..1057 | 5100 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:20:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zfrp8-RB | 1090 | CG3260-RB | 28..1068 | 17..1057 | 5100 | 99.3 | Plus |
| Zfrp8-RA | 1306 | CG3260-RA | 28..1068 | 17..1057 | 5100 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:20:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24134480..24135167 | 370..1057 | 3365 | 99.3 | Plus |
| 2R | 25286936 | 2R | 24134016..24134284 | 17..285 | 1330 | 99.6 | Plus |
| 2R | 25286936 | 2R | 24134340..24134426 | 284..370 | 420 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:20:19 has no hits.
BO23670.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:38 Download gff for
BO23670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zfrp8-RA | 12..1052 | 17..1059 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:07:26 Download gff for
BO23670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zfrp8-RA | 28..1068 | 17..1059 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:19:10 Download gff for
BO23670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Zfrp8-RA | 28..1068 | 17..1059 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:19:10 Download gff for
BO23670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24134342..24134426 | 286..370 | 98 | -> | Plus |
| 2R | 24134481..24135167 | 371..1059 | 98 | | Plus |
| 2R | 24134016..24134284 | 17..285 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:07:26 Download gff for
BO23670.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20021539..20021807 | 17..285 | 99 | -> | Plus |
| arm_2R | 20021865..20021949 | 286..370 | 98 | -> | Plus |
| arm_2R | 20022004..20022690 | 371..1059 | 98 | | Plus |
BO23670.pep Sequence
Translation from 16 to 1075
> BO23670.pep
MEIDLGFAEKSDNGAWLSNRYFPSKLGGQPAWLELEALPPTSQLQCSKCR
APKSFLAQLYAPFEDEYNFHRSIYVFLCRNSDCQEAQNASNFTVLRSQLP
RKNKFFSEEEPSDVGQPLPAVPCLKKLCAACGCHAPHACSKCKAIHYCSP
EHQRAHWPQHKPNCGAPEVATEKPLTQIVFPEFEIVMDSNPVESGEEDKD
DEARLAEFQELESSGKTGDLSNVSEAEMDKYFGNSAAADDKTFRQFKKQT
AAEPDQIVRYKRGGQPLWITNTVKTVEDQLNKLPNCIACGGERQFEFQIM
PQALTLLEDENLDWGVLAVYTCAKSCPIDGYVEELLIKQDIVAEDQSASF
LDH
BO23670.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:13:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Zfrp8-PB | 347 | CG3260-PB | 1..347 | 1..347 | 1874 | 100 | Plus |
| Zfrp8-PA | 347 | CG3260-PA | 1..347 | 1..347 | 1874 | 100 | Plus |
