BO23672.complete Sequence
898 bp assembled on 2010-04-13
GenBank Submission: KX794049
> BO23672.complete
GAAGTTATCAGTCGACATGGCAGCTGCACTGCCAGATCGGTTTAGTGCGG
GCAAACGGCAGTTCTGGCGCGAGTTTCTGGCCCTTTATCAGGGAATGCCA
GAGCTGTGGGACGTCCACCACCTCAATTACCGGAACAAGGAGTTGCGAAA
CCGGGCGTACGAGTTGCTGGAGAGGAAACTACGGGAGATACAGCCGAACG
CTACGCGCACAGAAGTCGGCAGGCGCATCAACATATTTCGCACCAATTAC
AGGCGGGAGCAGATGCGAATCCTCAAGCAGAAGGAGCTGGGGCTGCACTC
TGATCTCTGTAAGCCGACGCTCTGGTTCTACGACTACATGGGATTTCTCC
TCACCCAGGAGACCTTCCAGCACAGGACCAGAAAAGGTCGGGGCGGCAGA
CAGAAGCAAGATTTTCGCAGGGAAAAGGATGACAAATACCCCTTGAAAAA
TCCAGATCTCAACACGGAAAGCGTTTGTGATTGGCCGATCAAGGATGATA
ACGCTTTCAACTACCAGTCCGAACCGACTGCCCCGCAATCCGAAGAGGGT
TCCCTGCTCAGTCCAAAATTGGAGATCATAGAGCCGGAAGAAGGGCAGTG
TGAAGTCAAAGAGGAAAATAGTTTGGGAAATTCATTGGAAACGAAAGAAC
CCACATCCTCGATTCAAACAGATCCCGAGAACGAACGAGGAACTGCACCC
ATGCAACTCAGCGAGTCCTCCGAAGTTCTGGCCAGATCCTGGGCTATCCA
GTACGAGGAAATGTCCCCCACGCAACGGATTCTGGCACGAAAGGCCATCG
CAGACATCCTGTTTGAGGGATGCATGGGCAACCTGCGAGTAAACCGCGGC
GAACAACAGAGCACCGTGGCAAATCATTTCGCAAGCTTTCTAGACCAT
BO23672.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:20:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3386-RD | 867 | CG3386-PD | 1..864 | 17..880 | 4245 | 99.4 | Plus |
| CG3386-RC | 867 | CG3386-PC | 1..864 | 17..880 | 4245 | 99.4 | Plus |
| CG3386-RB | 867 | CG3386-PB | 1..864 | 17..880 | 4245 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:20:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3386-RD | 1494 | CG3386-RD | 206..1069 | 17..880 | 4245 | 99.4 | Plus |
| CG3386-RC | 1508 | CG3386-RC | 446..1309 | 17..880 | 4245 | 99.4 | Plus |
| CG3386-RB | 1446 | CG3386-RB | 384..1247 | 17..880 | 4245 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:20:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 680861..681310 | 880..431 | 2235 | 99.8 | Minus |
| 3L | 28110227 | 3L | 681372..681786 | 431..17 | 2015 | 99 | Minus |
Blast to na_te.dros performed on 2014-11-27 10:20:28 has no hits.
BO23672.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:39 Download gff for
BO23672.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3386-RA | 338..1201 | 17..882 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:07:31 Download gff for
BO23672.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3386-RB | 384..1247 | 17..882 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:19:14 Download gff for
BO23672.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3386-RB | 384..1247 | 17..882 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:19:14 Download gff for
BO23672.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 680859..681310 | 431..882 | 99 | <- | Minus |
| 3L | 681373..681786 | 17..430 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:07:31 Download gff for
BO23672.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 680859..681310 | 431..882 | 99 | <- | Minus |
| arm_3L | 681373..681786 | 17..430 | 99 | | Minus |
BO23672.pep Sequence
Translation from 16 to 898
> BO23672.pep
MAAALPDRFSAGKRQFWREFLALYQGMPELWDVHHLNYRNKELRNRAYEL
LERKLREIQPNATRTEVGRRINIFRTNYRREQMRILKQKELGLHSDLCKP
TLWFYDYMGFLLTQETFQHRTRKGRGGRQKQDFRREKDDKYPLKNPDLNT
ESVCDWPIKDDNAFNYQSEPTAPQSEEGSLLSPKLEIIEPEEGQCEVKEE
NSLGNSLETKEPTSSIQTDPENERGTAPMQLSESSEVLARSWAIQYEEMS
PTQRILARKAIADILFEGCMGNLRVNRGEQQSTVANHFASFLDH
BO23672.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:17:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3386-PD | 288 | CG3386-PD | 1..288 | 1..288 | 1524 | 100 | Plus |
| CG3386-PC | 288 | CG3386-PC | 1..288 | 1..288 | 1524 | 100 | Plus |
| CG3386-PB | 288 | CG3386-PB | 1..288 | 1..288 | 1524 | 100 | Plus |
| CG3386-PA | 288 | CG3386-PA | 1..288 | 1..288 | 1524 | 100 | Plus |
| CG5180-PC | 355 | CG5180-PC | 10..132 | 14..147 | 161 | 29.1 | Plus |
