Clone BO23673 Report

Search the DGRC for BO23673

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:236
Well:73
Vector:pDNR-Dual
Associated Gene/TranscriptCG10268-RA
Protein status:BO23673.pep: Imported from assembly
Sequenced Size:601

Clone Sequence Records

BO23673.complete Sequence

601 bp assembled on 2010-04-13

GenBank Submission: KX798589

> BO23673.complete
GAAGTTATCAGTCGACATGATGAAAATTGTACTCATCAGCGGCAAGCGAA
AGTGCGGCAAGGATTACATATCCGAGAGGCTGCAGCGGAGATTGGGCTCC
CGGTCGTGTATCGTTCGAATCTCAGAGCCCATTAAGTCGGAATGGGCTCG
CAAGCTGCAGTTGGACCTGGACGCTCTCCTCGGTGATGGACCCTACAAGG
AGAAGTACCGGCGCGACATGATTGTGTGGAGCGACGAGGTGCGGGCCCAG
GACTACGGCTACTTCTGCCGCGTGGCCATGGAGGAGGCGCTGAGTCGCCA
GCAGACGCCCTACATTCTTGTCAGCGATGTGCGGCGCAAGAACGACATCA
GGTGGTTCCGGGAGACTTACGGGCCGGAACGAGTCATCACCTTGCGTCTA
ACATCCCGTCCAGAAACGCGGTCTGCACGGGGATGGACCTTTACCGCAGG
AATAGACGATGTTCCCTCCGAGTGCGATCTGGATGATCTGGCCGACGGCT
TCGACGTGGTGTTGGCCAACGACGAGGAACTCGACCAGGAGGCCATCGAC
ATTCTGCTGGATAGGCTGCAGCTGCAGTATCGAGCAAGCTTTCTAGACCA
T

BO23673.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:15:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG10268-RA 570 CG10268-PA 1..567 17..583 2820 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:15:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG10268-RA 1156 CG10268-RA 222..788 17..583 2820 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:15:08
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 19579461..19579955 583..89 2460 99.8 Minus
2L 23513712 2L 19580057..19580130 90..17 370 100 Minus
Blast to na_te.dros performed on 2014-11-27 10:15:09 has no hits.

BO23673.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:26:28 Download gff for BO23673.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 217..783 17..585 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:06:28 Download gff for BO23673.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 222..788 17..585 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:16:58 Download gff for BO23673.complete
Subject Subject Range Query Range Percent Splice Strand
CG10268-RA 222..788 17..585 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:16:58 Download gff for BO23673.complete
Subject Subject Range Query Range Percent Splice Strand
2L 19579459..19579953 91..585 99 <- Minus
2L 19580057..19580130 17..90 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:06:28 Download gff for BO23673.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 19579459..19579953 91..585 99 <- Minus
arm_2L 19580057..19580130 17..90 100   Minus

BO23673.pep Sequence

Translation from 16 to 601

> BO23673.pep
MMKIVLISGKRKCGKDYISERLQRRLGSRSCIVRISEPIKSEWARKLQLD
LDALLGDGPYKEKYRRDMIVWSDEVRAQDYGYFCRVAMEEALSRQQTPYI
LVSDVRRKNDIRWFRETYGPERVITLRLTSRPETRSARGWTFTAGIDDVP
SECDLDDLADGFDVVLANDEELDQEAIDILLDRLQLQYRASFLDH

BO23673.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:13:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG10268-PA 189 CG10268-PA 1..189 1..189 983 100 Plus