BO23720.complete Sequence
634 bp assembled on 2010-04-13
GenBank Submission: KX797853
> BO23720.complete
GAAGTTATCAGTCGACATGGAACGCTGGCATGATCGCGTGGCTGTGGTCA
CGGGTGCCAGCTCCGGGATAGGAGCTGCAGTGGCACGCCACTTGGTGAGT
GCAGGGGTCATTGTTGTAGGTCTGGCCCGTCGGGTCGACCGCATGAAGGC
TATCAAGGAACAACTGCCGCCGGAGCTGCAGGGCCGCCTGCATGCCATCC
ACTGCGATGTCGAAGATCTGGACTCGGTGACGGCTGCCTTTGACTGGATC
GAGGAGCAGCTCGGCGGATGTGACATCCTGGTGAACAACGCGGGATGCCT
GAACCCCGGACAACTTCTCACCCTGGAGCTAGAGCAGCTGCAGCAGGTCC
TGAACGTGAACTTGATGGGCGTGGTCATCTGCACCCGCCGCGCCTTTCGC
TCAATGCAGCAACGCGAGGTGGATGGCCATGTGATCCTCATTAACAGCCT
AACGGGCCGTAACATCATCAATCCACCTGGTGACGAGCTGCAGGTGCTCA
ACATGTATCCGCTTACCAAGCACGGGGTTACGGCCATGTTGGAAGTCCTG
CGACAGGAGCTGCGCGGATTCAAGACTAAGATAAAGGTCACAGTGAGTGC
ACAAAAATCGATCAAAGCAAGCTTTCTAGACCAT
BO23720.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:57:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40486-RC | 744 | CG40486-PC | 1..576 | 17..592 | 2880 | 100 | Plus |
| CG40486-RB | 744 | CG40486-PB | 1..576 | 17..592 | 2880 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:57:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40486-RC | 960 | CG40486-RC | 127..702 | 17..592 | 2880 | 100 | Plus |
| CG40486-RB | 940 | CG40486-RB | 127..702 | 17..592 | 2880 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:57:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 22959366..22959965 | 616..17 | 3000 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 08:57:20 has no hits.
BO23720.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:23:49 Download gff for
BO23720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40486-RA | 112..711 | 17..618 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:34:53 Download gff for
BO23720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40486-RA | 112..711 | 17..618 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:29:23 Download gff for
BO23720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG40486-RB | 127..702 | 17..592 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:29:23 Download gff for
BO23720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 22959364..22959965 | 17..618 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:34:53 Download gff for
BO23720.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 22361200..22361801 | 17..618 | 99 | | Minus |
BO23720.pep Sequence
Translation from 16 to 634
> BO23720.pep
MERWHDRVAVVTGASSGIGAAVARHLVSAGVIVVGLARRVDRMKAIKEQL
PPELQGRLHAIHCDVEDLDSVTAAFDWIEEQLGGCDILVNNAGCLNPGQL
LTLELEQLQQVLNVNLMGVVICTRRAFRSMQQREVDGHVILINSLTGRNI
INPPGDELQVLNMYPLTKHGVTAMLEVLRQELRGFKTKIKVTVSAQKSIK
ASFLDH
BO23720.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:17:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG40486-PC | 247 | CG40486-PC | 1..192 | 1..192 | 979 | 100 | Plus |
| CG40486-PB | 247 | CG40486-PB | 1..192 | 1..192 | 979 | 100 | Plus |
| CG40485-PA | 231 | CG40485-PA | 1..194 | 1..194 | 604 | 59.3 | Plus |
| CG40485-PB | 247 | CG40485-PB | 1..192 | 1..192 | 596 | 58.9 | Plus |
| antdh-PA | 250 | CG1386-PA | 1..192 | 1..192 | 543 | 54.7 | Plus |
