BO23729.complete Sequence
1027 bp assembled on 2010-04-15
GenBank Submission: KX797937
> BO23729.complete
GAAGTTATCAGTCGACATGGGAAGTGATCGCACGTTAAAAAAGCAAAAGA
TGTCGGTATTACAGGAACTCAAGAAAATCACCACAATTGTGGCTGACACC
GGCGACTTTGAAGCCATCAACATCTATAAGCCCACGGATGCCACCACTAA
TCCCTCCCTCATCTTGTCCGCTTCGTCCATGGAGCGGTACCAGCCGCTGG
TCCAAAAGGCGGTGGAATACGCCAAGGGCAAGAAGGGCTCCGTGAGTGAG
CAGGTGGCCGAGGCCATGGACTACCTGTGCGTGCTGTTCGGAACGGAAAT
CCTGAAGGTTGTGCCCGGTCGCGTTTCCACCGAGATCGATGCCCGCTTGT
CCTTCGACACCAAGAAGAGCGTGGAGAAGGCCCTGAAGCTGATCGCCCTG
TACAAATCCCTGGGCGTCGACAAGGAGCGAATTCTGATCAAGCTGGCGTC
CACCTGGGAGGGCATCAAGGCGGCCGAGATCCTGGAGAACGAGCACGGTG
TGCACTGCAACCTGACGCTCCTTTTCTCGTTCGCACAGGCCGTGGCTTGC
GCCGAGGCCGGCGTGACCCTCATCTCCCCGTTCGTGGGCCGCATCCTGGA
CTGGTACGTGGCCAACACGGATACCAAGAAGTTCGAGGCGCTCAAGGACC
CGGGCGTGATCTCCGTGACGAACATCTACAACTACTACAAGAAGTTCGGC
TACAAGACCCTGGTCATGGGCGCCTCCTTCCGTAACGTGGGCGAAATCAA
GGCCCTGGCTGGCTGCGATCTGCTTACCATCAGCCCAGCGCTGCTTAAGG
AGCTGGAGAACGAGACCGAGTCGGTGGTCACCTACCTGTCCGTAAGCAAC
GCCAAGCTGCAGGACATCGAGAAGATCACCGTCGATGAGAGCCGGTTCCG
CTGGCTGCTCAACGAGGACGCCATGGCCACCGACAAACTTTCCGAGGGCA
TCAGGAAGTTCGCCGTGGATACTGTTAAGCTGGAGAATTTGATTAAGACC
TATCTTAAGGCAAGCTTTCTAGACCAT
BO23729.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:03:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tal-RA | 996 | CG2827-PA | 1..993 | 17..1009 | 4965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tal-RA | 1116 | CG2827-RA | 21..1013 | 17..1009 | 4965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23941239..23942011 | 237..1009 | 3865 | 100 | Plus |
| 2R | 25286936 | 2R | 23941055..23941180 | 112..237 | 630 | 100 | Plus |
| 2R | 25286936 | 2R | 23940430..23940526 | 17..113 | 485 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:03:49 has no hits.
BO23729.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:17 Download gff for
BO23729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tal-RA | 18..1010 | 17..1011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:43:48 Download gff for
BO23729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tal-RA | 21..1013 | 17..1011 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:17:33 Download gff for
BO23729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tal-RA | 21..1013 | 17..1011 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:17:33 Download gff for
BO23729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23940430..23940526 | 17..113 | 100 | -> | Plus |
| 2R | 23941057..23941180 | 114..237 | 100 | -> | Plus |
| 2R | 23941240..23942011 | 238..1011 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:43:48 Download gff for
BO23729.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19827953..19828049 | 17..113 | 100 | -> | Plus |
| arm_2R | 19828580..19828703 | 114..237 | 100 | -> | Plus |
| arm_2R | 19828763..19829534 | 238..1011 | 99 | | Plus |
BO23729.pep Sequence
Translation from 16 to 1027
> BO23729.pep
MGSDRTLKKQKMSVLQELKKITTIVADTGDFEAINIYKPTDATTNPSLIL
SASSMERYQPLVQKAVEYAKGKKGSVSEQVAEAMDYLCVLFGTEILKVVP
GRVSTEIDARLSFDTKKSVEKALKLIALYKSLGVDKERILIKLASTWEGI
KAAEILENEHGVHCNLTLLFSFAQAVACAEAGVTLISPFVGRILDWYVAN
TDTKKFEALKDPGVISVTNIYNYYKKFGYKTLVMGASFRNVGEIKALAGC
DLLTISPALLKELENETESVVTYLSVSNAKLQDIEKITVDESRFRWLLNE
DAMATDKLSEGIRKFAVDTVKLENLIKTYLKASFLDH
BO23729.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:18:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tal-PA | 331 | CG2827-PA | 1..331 | 1..331 | 1651 | 100 | Plus |
