BO23730.complete Sequence
520 bp assembled on 2010-04-13
GenBank Submission: KX797151
> BO23730.complete
GAAGTTATCAGTCGACATGGAGTTCATTAGCCATTTCTTGCGAGCGACGA
GCAGACGCACCGCCGCATTGGGTCCAATCCTGCAAAGAAATCGTAGCGAA
ATCATCCAAAAACAATCTTTGACCAATCGACAGGCATTCCGCAGATACAG
ATCCAGCTGCAGCACCATGGACACCACCGTTCACTCCGCCGGCATCGATG
AGACCCACCTGGTGCCCATGAGCGTCATCCAGCGACCCATTCCCTCCGTC
CTGGACGAGCAGAAGGTGCAATCCCTGATGGAAACCATTAAGAACGAAAC
CAGCGAAGATGAGGTGCCCCCCATCGACCTGCTGTGGATCTCGGGCAGCG
AGGGAGGCGACTACTACTTCAGCTTCGGCGGATGCCACCGGTTCGAGGCG
TACAAGCGGCTACAGCGGCCGACGATCAAGGCGAAGCTGGTGAAGTCCAC
ACTGGGCGATCTGTATCACTACATGGGCTCCAGCGCGCCCAAGTACCTGG
CCGCAAGCTTTCTAGACCAT
BO23730.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:17:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6762-RA | 489 | CG6762-PA | 1..486 | 17..502 | 2430 | 100 | Plus |
| CG6762-RD | 459 | CG6762-PD | 99..456 | 145..502 | 1790 | 100 | Plus |
| CG6762-RC | 339 | CG6762-PC | 1..336 | 167..502 | 1680 | 100 | Plus |
| CG6762-RD | 459 | CG6762-PD | 1..100 | 17..116 | 500 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:17:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6762-RA | 984 | CG6762-RA | 149..635 | 16..502 | 2435 | 100 | Plus |
| CG6762-RC | 788 | CG6762-RC | 149..616 | 16..502 | 2115 | 96.1 | Plus |
| CG6762-RB | 921 | CG6762-RB | 362..749 | 115..502 | 1940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:17:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17858050..17858261 | 291..502 | 1060 | 100 | Plus |
| X | 23542271 | X | 17857473..17857650 | 115..292 | 890 | 100 | Plus |
| X | 23542271 | X | 17857260..17857358 | 16..114 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:17:06 has no hits.
BO23730.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:23:50 Download gff for
BO23730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6762-RA | 92..577 | 17..504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:30:08 Download gff for
BO23730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6762-RA | 150..635 | 17..504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:14:52 Download gff for
BO23730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6762-RA | 150..635 | 17..504 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:14:52 Download gff for
BO23730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17858052..17858261 | 293..504 | 99 | | Plus |
| X | 17857261..17857358 | 17..114 | 100 | -> | Plus |
| X | 17857473..17857650 | 115..292 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:30:08 Download gff for
BO23730.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17752085..17752294 | 293..504 | 99 | | Plus |
| arm_X | 17751294..17751391 | 17..114 | 100 | -> | Plus |
| arm_X | 17751506..17751683 | 115..292 | 100 | -> | Plus |
BO23730.pep Sequence
Translation from 16 to 520
> BO23730.pep
MEFISHFLRATSRRTAALGPILQRNRSEIIQKQSLTNRQAFRRYRSSCST
MDTTVHSAGIDETHLVPMSVIQRPIPSVLDEQKVQSLMETIKNETSEDEV
PPIDLLWISGSEGGDYYFSFGGCHRFEAYKRLQRPTIKAKLVKSTLGDLY
HYMGSSAPKYLAASFLDH
BO23730.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:13:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6762-PA | 162 | CG6762-PA | 1..162 | 1..162 | 835 | 100 | Plus |
| CG6762-PD | 152 | CG6762-PD | 1..152 | 1..162 | 765 | 93.8 | Plus |
| CG6762-PC | 112 | CG6762-PC | 1..112 | 51..162 | 587 | 100 | Plus |
| CG6762-PB | 112 | CG6762-PB | 1..112 | 51..162 | 587 | 100 | Plus |
