BO23760.complete Sequence
670 bp assembled on 2010-04-15
GenBank Submission: KX795357
> BO23760.complete
GAAGTTATCAGTCGACATGCCAGCGGATCCATCTGAAGAAGTTGCCCCTC
AGGTCCCGAAGACCGAGCTAGAAGAGCTGCAAATTAATGCGCAAGGAGTA
GCCGATGAGTCCCTGGAAAGTACGCGACGTATGCTTGCTCTGTGTGAGGA
GAGCAAGGAGGCAGGGATTCGAACACTTGTAGCCCTTGATGATCAAGGAG
AACAACTGGATCGTATTGAAGAAGGAATGGATCAAATTAATGCAGACATG
AGAGAAGCAGAAAAAAATTTAAGTGGAATGGAAAAATGTTGCGGCATTTG
TGTTCTTCCGTGCAATAAAAGTCAATCATTCAAAGAAGATGATGGGACCT
GGAAAGGAAATGATGACGGAAAAGTTGTAAATAATCAGCCACAGAGAGTG
ATGGATGATAGAAATGGCATGATGGCGCAAGCGGGTTATATTGGCAGGAT
AACGAACGACGCTAGAGAAGATGAAATGGAAGAAAATATGGGCCAGGTAA
ACACTATGATAGGCAATCTCCGAAATATGGCATTGGATATGGGCTCTGAG
CTGGAAAATCAAAATCGTCAAATTGATAGAATAAACCGGAAGGGTGAATC
TAATGAAGCGCGGATAGCAGTTGCTAATCAAAGGGCACATCAACTATTAA
AGGCAAGCTTTCTAGACCAT
BO23760.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:49:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snap25-RA | 639 | CG40452-PA | 1..636 | 17..652 | 3180 | 100 | Plus |
| Snap25-RC | 639 | CG40452-PC | 1..636 | 17..652 | 2925 | 97.3 | Plus |
| Snap24-RA | 639 | CG9474-PA | 70..281 | 101..312 | 280 | 75.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:49:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snap25-RA | 2233 | CG40452-RA | 133..768 | 17..652 | 3180 | 100 | Plus |
| Snap25-RC | 2233 | CG40452-RC | 133..768 | 17..652 | 2925 | 97.3 | Plus |
| Snap24-RA | 1846 | CG9474-RA | 371..582 | 101..312 | 280 | 75.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:48:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 24258490..24258637 | 446..593 | 740 | 100 | Plus |
| 3L | 28110227 | 3L | 24253793..24253922 | 319..448 | 650 | 100 | Plus |
| 3L | 28110227 | 3L | 24210019..24210138 | 199..318 | 600 | 100 | Plus |
| 3L | 28110227 | 3L | 24079466..24079558 | 17..109 | 465 | 100 | Plus |
| 3L | 28110227 | 3L | 24297679..24297740 | 591..652 | 310 | 100 | Plus |
| 3R | 32079331 | 3R | 9762569..9762780 | 312..101 | 280 | 75.5 | Minus |
| 3L | 28110227 | 3L | 24161129..24161179 | 150..200 | 255 | 100 | Plus |
| 3L | 28110227 | 3L | 24131194..24131237 | 108..151 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:49:00 has no hits.
BO23760.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-04-19 16:24:20 Download gff for
BO23760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snap25-RA | 84..719 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:35:03 Download gff for
BO23760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snap25-RA | 133..768 | 17..654 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:10:32 Download gff for
BO23760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Snap25-RA | 133..768 | 17..654 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:10:32 Download gff for
BO23760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 24210019..24210138 | 199..318 | 100 | -> | Plus |
| 3L | 24253793..24253921 | 319..447 | 100 | -> | Plus |
| 3L | 24258492..24258636 | 448..592 | 100 | -> | Plus |
| 3L | 24297681..24297740 | 593..654 | 96 | | Plus |
| 3L | 24079466..24079558 | 17..109 | 100 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:35:03 Download gff for
BO23760.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 24246893..24247021 | 319..447 | 100 | -> | Plus |
| arm_3L | 24251592..24251736 | 448..592 | 100 | -> | Plus |
| arm_3L | 24290781..24290840 | 593..654 | 96 | | Plus |
| arm_3L | 24072566..24072658 | 17..109 | 100 | == | Plus |
| arm_3L | 24203119..24203238 | 199..318 | 100 | -> | Plus |
BO23760.pep Sequence
Translation from 16 to 670
> BO23760.pep
MPADPSEEVAPQVPKTELEELQINAQGVADESLESTRRMLALCEESKEAG
IRTLVALDDQGEQLDRIEEGMDQINADMREAEKNLSGMEKCCGICVLPCN
KSQSFKEDDGTWKGNDDGKVVNNQPQRVMDDRNGMMAQAGYIGRITNDAR
EDEMEENMGQVNTMIGNLRNMALDMGSELENQNRQIDRINRKGESNEARI
AVANQRAHQLLKASFLDH
BO23760.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:18:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Snap25-PA | 212 | CG40452-PA | 1..212 | 1..212 | 1093 | 100 | Plus |
| Snap25-PC | 212 | CG40452-PC | 1..212 | 1..212 | 1065 | 96.7 | Plus |
| Snap24-PA | 212 | CG9474-PA | 9..212 | 14..213 | 751 | 71.6 | Plus |
